ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123093577	exosome complex exonuclease RRP44 homolog A
tae-r.2	123105785	exosome complex exonuclease RRP44 homolog A
tae-r.2	123098847	exosome complex exonuclease RRP44 homolog A
hvu-r.1	123449790	exosome complex exonuclease RRP44 homolog A
bdi-r.1	100829846	exosome complex exonuclease RRP44 homolog A
osa-u.5	4331494	exosome complex exonuclease RRP44 homolog A
zma-u.5	100194408	uncharacterized LOC100194408
sbi-r.1	8085691	exosome complex exonuclease RRP44 homolog A
ath-u.5	EMB2763	ribonuclease II family protein
gma-u.5	100806652	exosome complex exonuclease RRP44 homolog A
gma-u.5	100782456	exosome complex exonuclease RRP44 homolog A
sly-u.5	101263664	exosome complex exonuclease RRP44 homolog A
bra-r.6	103837810	exosome complex exonuclease RRP44 homolog A
vvi-u.5	100267912	exosome complex exonuclease RRP44 homolog A
ppo-u.5	18101070	exosome complex exonuclease RRP44 homolog A
mtr-u.5	11424636	exosome complex exonuclease RRP44 homolog A
ghi-r.1	107955297	exosome complex exonuclease RRP44 homolog A
ghi-r.1	107954781	exosome complex exonuclease RRP44 homolog A
bna-r.1	106366378	exosome complex exonuclease RRP44 homolog A
bna-r.1	106401403	exosome complex exonuclease RRP44 homolog A
cit-r.1	102613015	exosome complex exonuclease RRP44 homolog A
nta-r.1	107829893	exosome complex exonuclease RRP44 homolog A
nta-r.1	107765045	exosome complex exonuclease RRP44 homolog A-like
cre-r.1	CHLRE_14g613850v5	uncharacterized protein

Annotation

functional annotation

KEGG

taes03018 [list] [network] RNA degradation (374 genes)

GO BP

GO:0071031 [list] [network] nuclear mRNA surveillance of mRNA 3'-end processing	(3 genes)	IEA
GO:0016075 [list] [network] rRNA catabolic process	(39 genes)	IEA

GO CC

GO:0000177 [list] [network] cytoplasmic exosome (RNase complex)	(35 genes)	IEA
GO:0000176 [list] [network] nuclear exosome (RNase complex)	(47 genes)	IEA

GO MF

GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity	(136 genes)	IEA
GO:0004519 [list] [network] endonuclease activity	(341 genes)	IEA
GO:0003723 [list] [network] RNA binding	(4004 genes)	IEA

Protein

XP_044371497.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, chlo_mito 4, mito 3, nucl 2

(predict for XP_044371497.1)

Subcellular
localization
TargetP

mito 4, other 4

(predict for XP_044371497.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123093577	tae-r.2 for 123105785	tae-r.2 for 123098847	hvu-r.1 for 123449790	bdi-r.1 for 100829846	osa-u.5 for 4331494	zma-u.5 for 100194408	sbi-r.1 for 8085691	ath-u.5 for EMB2763	gma-u.5 for 100806652	gma-u.5 for 100782456	sly-u.5 for 101263664	bra-r.6 for 103837810	vvi-u.5 for 100267912	ppo-u.5 for 18101070	mtr-u.5 for 11424636	ghi-r.1 for 107955297	ghi-r.1 for 107954781	bna-r.1 for 106366378	bna-r.1 for 106401403	cit-r.1 for 102613015	nta-r.1 for 107829893	nta-r.1 for 107765045	cre-r.1 for CHLRE_14g613850v5

Ortholog

Ortholog ID: 9983

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

cit

nta

cre

Symbol

EMB2763

Function^*

exosome complex exonuclease RRP44 homolog A

uncharacterized LOC100194408

exosome complex exonuclease RRP44 homolog A

ribonuclease II family protein

exosome complex exonuclease RRP44 homolog A

exosome complex exonuclease RRP44 homolog A-like

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	3
tae00970	Aminoacyl-tRNA biosynthesis	3
tae03018	RNA degradation	3
tae03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	3
tae03015	mRNA surveillance pathway	3
tae03018	RNA degradation	3
tae03020	RNA polymerase	2
tae03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	4
tae03015	mRNA surveillance pathway	4
tae03083	Polycomb repressive complex	3
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03030	DNA replication	3
hvu03440	Homologous recombination	3
hvu03420	Nucleotide excision repair	2
hvu03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	3
bdi03018	RNA degradation	2
bdi03040	Spliceosome	2
bdi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2
zma04382	Cornified envelope formation	2
zma03008	Ribosome biogenesis in eukaryotes	2
zma03013	Nucleocytoplasmic transport	2
zma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00970	Aminoacyl-tRNA biosynthesis	3
sbi03040	Spliceosome	2
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	3
gma00514	Other types of O-glycan biosynthesis	2
gma03440	Homologous recombination	2
gma03040	Spliceosome	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2
gma03440	Homologous recombination	2
gma04120	Ubiquitin mediated proteolysis	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	7
bra03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	3
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi03008	Ribosome biogenesis in eukaryotes	3
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi03008	Ribosome biogenesis in eukaryotes	3
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	10
bna03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	6
bna03018	RNA degradation	2
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta03018	RNA degradation	2
nta03015	mRNA surveillance pathway	2
nta00970	Aminoacyl-tRNA biosynthesis	2
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	6
nta03018	RNA degradation	2
nta03015	mRNA surveillance pathway	2
nta03008	Ribosome biogenesis in eukaryotes	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	3
cre03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

123093577

123105785

123098847

123449790

100829846

4331494

100194408

8085691

816257

100806652

100782456

101263664

103837810

100267912

18101070

11424636

107955297

107954781

106366378

106401403

102613015

107829893

107765045

66056185

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123093577 (tae-r.2 coexpression data)

Top 50 enrichment test to 123093577 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	cit	nta	cre	sot
Paralog	3	1	1	1	1	1	1	2	1	1	1	1	1	2	2	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123093577 (tae-r.2 coexpression data)

Top 50 enrichment test to 123093577 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**