ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	9266473	RING-H2 finger protein ATL80
osa-u.5	4330352	RING-H2 finger protein ATL80
osa-u.5	4336787	probable E3 ubiquitin-protein ligase ATL44
zma-u.5	100192077	putative RING zinc finger domain superfamily protein
zma-u.5	100284205	uncharacterized LOC100284205
zma-u.5	100283712	RING-H2 finger protein ATL1R
ath-u.5	RHA3A	RING-H2 finger A3A
ath-u.5	RHA3B	RING-H2 finger A3B
ath-u.5	AT1G20823	RING/U-box superfamily protein
gma-u.5	100786769	RING-H2 finger protein ATL8
gma-u.5	100787383	RING-H2 finger protein ATL8
gma-u.5	100789620	RING-H2 finger protein ATL8
sly-u.5	101254466	RING-H2 finger protein ATL80
sly-u.5	101262287	RING-H2 finger protein ATL8
sly-u.5	101264584	RING-H2 finger protein ATL8-like
vvi-u.5	100260977	RING-H2 finger protein ATL80
vvi-u.5	100266753	RING-H2 finger protein ATL8
ppo-u.5	7485656	RING-H2 finger protein ATL8
ppo-u.5	7471753	RING-H2 finger protein ATL8
mtr-u.5	11428288	RING-H2 finger protein ATL8
mtr-u.5	11405802	RING-H2 finger protein ATL8
mtr-u.5	11411600	RING-H2 finger protein ATL80

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044422421.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, mito 1, plas 1, vacu 1, cyto_mito 1

(predict for XP_044422421.1)

Subcellular
localization
TargetP

chlo 4

(predict for XP_044422421.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 9266473	osa-u.5 for 4330352	osa-u.5 for 4336787	zma-u.5 for 100192077	zma-u.5 for 100284205	zma-u.5 for 100283712	ath-u.5 for RHA3A	ath-u.5 for RHA3B	ath-u.5 for AT1G20823	gma-u.5 for 100786769	gma-u.5 for 100787383	gma-u.5 for 100789620	sly-u.5 for 101254466	sly-u.5 for 101262287	sly-u.5 for 101264584	vvi-u.5 for 100260977	vvi-u.5 for 100266753	ppo-u.5 for 7485656	ppo-u.5 for 7471753	mtr-u.5 for 11428288	mtr-u.5 for 11405802	mtr-u.5 for 11411600

Ortholog

Ortholog ID: 374

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

RHA3B

Function^*

RING-H2 finger protein ATL74

probable E3 ubiquitin-protein ligase ATL44

RING-H2 finger protein ATL80

uncharacterized LOC100284205

RING-H2 finger protein ATL1R

RING-H2 finger protein ATL74

probable E3 ubiquitin-protein ligase ATL45

RING-H2 finger A3B

RING/U-box superfamily protein

RING-H2 finger protein ATL8

RING-H2 finger protein ATL8-like

RING-H2 finger protein ATL80

RING-H2 finger protein ATL8

probable E3 ubiquitin-protein ligase ATL44

RING-H2 finger protein ATL8

RING-H2 finger protein ATL80

RING-H2 finger protein ATL8

RING-H2 finger protein ATL80

RING-H2 finger protein ATL8

RING-H2 finger protein ATL80

RING-H2 finger protein ATL80-like

RING-H2 finger protein ATL8-like

RING-H2 finger protein ATL80

RING-H2 finger protein ATL8

RING-H2 finger protein ATL80-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00250	Alanine, aspartate and glutamate metabolism	4
gma01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	2
nta03082	ATP-dependent chromatin remodeling	2
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

123042069

123451909

100822098

100829815

9266473

4330352

100284205

100283712

8060446

8066387

829700

838674

100813341

100786769

101248283

101254466

103832100

103845949

100266753

100260977

7492116

7471753

11411600

11428288

107917879

107922003

111210253

102600767

102579592

102610566

107807258

107765274

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 9266473 (osa-u.5 coexpression data)

Top 50 enrichment test to 9266473 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	3	3	3	3	2	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 9266473 (osa-u.5 coexpression data)

Top 50 enrichment test to 9266473 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**