Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123156476   extensin 
 tae-r.2   123169693   extensin 
 tae-r.2   123147715   leucine-rich repeat extensin-like protein 5 
 hvu-r.1   123407899   extensin 
 bdi-r.1   100834620   atrophin-1 
 osa-u.5   4344412   branchpoint-bridging protein 
 sbi-r.1   8068548   splicing factor 1 
 ath-u.5   AT3G32940   RNA-binding KH domain-containing protein 
 gma-u.5   102668428   splicing factor 1 
 gma-u.5   100777227   splicing factor 1 
 sly-u.5   101266547   uncharacterized LOC101266547 
 bra-r.6   103874905   protein transport protein Sec24-like CEF 
 vvi-u.5   100246694   vegetative cell wall protein gp1 
 ppo-u.5   7461374   uncharacterized LOC7461374 
 ppo-u.5   7483260   uncharacterized LOC7483260 
 mtr-u.5   11442475   vegetative cell wall protein gp1 
 ghi-r.1   121220152   splicing factor 1 
 ghi-r.1   107938377   splicing factor 1 
 bna-r.1   106410352   splicing factor 1 
 bna-r.1   125589775   uncharacterized LOC125589775 
 sot-r.1   102603874   uncharacterized LOC102603874 
 sot-r.1   102578234   splicing factor 1 
 cit-r.1   102625244   uncharacterized LOC102625244 
 nta-r.1   107783052   uncharacterized LOC107783052 
 nta-r.1   107793768   uncharacterized LOC107793768 

close


Top 50 coexpressed genes to 123156476 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123156476 (tae-r.2 coexpression data)

CoexMap"123156476"


taeLOC123156476 | Entrez gene ID : 123156476    
Species tae hvu bdi osa sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta zma cre
Paralog 3 1 1 1 1 1 2 1 1 1 2 1 2 2 2 1 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03040 [list] [network] Spliceosome (1516 genes)
GO BP
GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome  (41 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
Protein XP_044430538.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 2  (predict for XP_044430538.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_044430538.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123156476
tae-r.2
for
123169693
tae-r.2
for
123147715
hvu-r.1
for
123407899
bdi-r.1
for
100834620
osa-u.5
for
4344412
sbi-r.1
for
8068548
ath-u.5
for
AT3G32940
gma-u.5
for
102668428
gma-u.5
for
100777227
sly-u.5
for
101266547
bra-r.6
for
103874905
vvi-u.5
for
100246694
ppo-u.5
for
7461374
ppo-u.5
for
7483260
mtr-u.5
for
11442475
ghi-r.1
for
121220152
ghi-r.1
for
107938377
bna-r.1
for
106410352
bna-r.1
for
125589775
sot-r.1
for
102603874
sot-r.1
for
102578234
cit-r.1
for
102625244
nta-r.1
for
107783052
nta-r.1
for
107793768


Ortholog ID: 10123
Species tae tae tae hvu bdi osa sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot sot cit nta nta
Symbol LOC123156476 LOC123169693 LOC123147715 LOC123407899 LOC100834620 LOC4344412 LOC8068548 AT3G32940 LOC102668428 LOC100777227 LOC101266547 LOC103874905 LOC100246694 LOC7461374 LOC7483260 LOC11442475 LOC121220152 LOC107938377 LOC106410352 LOC125589775 LOC102603874 LOC102578234 LOC102625244 LOC107783052 LOC107793768
Function* extensin extensin leucine-rich repeat extensin-like protein 5 extensin atrophin-1 branchpoint-bridging protein splicing factor 1 RNA-binding KH domain-containing protein splicing factor 1 splicing factor 1 uncharacterized LOC101266547 protein transport protein Sec24-like CEF vegetative cell wall protein gp1 uncharacterized LOC7461374 uncharacterized LOC7483260 vegetative cell wall protein gp1 splicing factor 1 splicing factor 1 splicing factor 1 uncharacterized LOC125589775 uncharacterized LOC102603874 splicing factor 1 uncharacterized LOC102625244 uncharacterized LOC107783052 uncharacterized LOC107793768
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03013 Nucleocytoplasmic transport 4
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 10
ppo03013 Nucleocytoplasmic transport 3
ppo03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04016 MAPK signaling pathway - plant 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00230 Purine metabolism 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00230 Purine metabolism 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123156476 123169693 123147715 123407899 100834620 4344412 8068548 823058 102668428 100777227 101266547 103874905 100246694 7461374 7483260 11442475 121220152 107938377 106410352 125589775 102603874 102578234 102625244 107783052 107793768
The preparation time of this page was 0.2 [sec].