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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123172056   transcription initiation factor TFIID subunit 4b 
 tae-r.2   123097368   transcription initiation factor TFIID subunit 4b 
 tae-r.2   123086110   transcription initiation factor TFIID subunit 4b 
 hvu-r.1   123448440   transcription initiation factor TFIID subunit 4b-like 
 bdi-r.1   100829985   transcription initiation factor TFIID subunit 4b 
 osa-u.5   4333214   transcription initiation factor TFIID subunit 4b 
 zma-u.5   100278950   transcription initiation factor TFIID subunit 4b 
 sbi-r.1   8063215   transcription initiation factor TFIID subunit 4b 
 ath-u.5   TAF4   TBP-associated factor 4 
 gma-u.5   100798514   transcription initiation factor TFIID subunit 4b 
 gma-u.5   100797127   transcription initiation factor TFIID subunit 4b 
 gma-u.5   100795389   transcription initiation factor TFIID subunit 4b 
 sly-u.5   101262209   transcription initiation factor TFIID subunit 4b 
 bra-r.6   103848801   transcription initiation factor TFIID subunit 4b 
 bra-r.6   103827992   transcription initiation factor TFIID subunit 4b 
 vvi-u.5   100252311   transcription initiation factor TFIID subunit 4b 
 ppo-u.5   7497338   transcription initiation factor TFIID subunit 4b 
 ppo-u.5   7462851   transcription initiation factor TFIID subunit 4b 
 mtr-u.5   25489951   uncharacterized LOC25489951 
 mtr-u.5   25489943   transcription initiation factor TFIID subunit 4b 
 ghi-r.1   107922134   transcription initiation factor TFIID subunit 4b 
 ghi-r.1   107905215   transcription initiation factor TFIID subunit 4b 
 ghi-r.1   107892395   transcription initiation factor TFIID subunit 4b 
 bna-r.1   106410203   transcription initiation factor TFIID subunit 4b-like 
 bna-r.1   106371586   transcription initiation factor TFIID subunit 4b 
 bna-r.1   106358409   transcription initiation factor TFIID subunit 4b 
 sot-r.1   102579610   transcription initiation factor TFIID subunit 4b-like 
 sot-r.1   102603242   transcription initiation factor TFIID subunit 4b 
 cit-r.1   102619964   transcription initiation factor TFIID subunit 4b 
 nta-r.1   107766026   transcription initiation factor TFIID subunit 4b-like 
 nta-r.1   107765591   transcription initiation factor TFIID subunit 4b 
 nta-r.1   107829196   transcription initiation factor TFIID subunit 4b 

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Top 50 coexpressed genes to 123172056 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123172056 (tae-r.2 coexpression data)

CoexMap"123172056"


taeLOC123172056 | Entrez gene ID : 123172056    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 3 1 2 1 2 2 3 3 2 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03022 [list] [network] Basal transcription factors (188 genes)
GO BP
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (143 genes)  IEA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (71 genes)  IEA  
GO MF
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (68 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (670 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
Protein XP_044445034.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_044445034.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044445034.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123172056
tae-r.2
for
123097368
tae-r.2
for
123086110
hvu-r.1
for
123448440
bdi-r.1
for
100829985
osa-u.5
for
4333214
zma-u.5
for
100278950
sbi-r.1
for
8063215
ath-u.5
for
TAF4
gma-u.5
for
100798514
gma-u.5
for
100797127
gma-u.5
for
100795389
sly-u.5
for
101262209
bra-r.6
for
103848801
bra-r.6
for
103827992
vvi-u.5
for
100252311
ppo-u.5
for
7497338
ppo-u.5
for
7462851
mtr-u.5
for
25489951
mtr-u.5
for
25489943
ghi-r.1
for
107922134
ghi-r.1
for
107905215
ghi-r.1
for
107892395
bna-r.1
for
106410203
bna-r.1
for
106371586
bna-r.1
for
106358409
sot-r.1
for
102579610
sot-r.1
for
102603242
cit-r.1
for
102619964
nta-r.1
for
107766026
nta-r.1
for
107765591
nta-r.1
for
107829196


Ortholog ID: 5386
Species tae tae tae hvu bdi osa zma sbi ath gma gma gma sly bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta
Symbol LOC123172056 LOC123097368 LOC123086110 LOC123448440 LOC100829985 LOC4333214 LOC100278950 LOC8063215 TAF4 LOC100798514 LOC100797127 LOC100783067 LOC101262209 LOC103848801 LOC103827992 LOC100252311 LOC7497338 LOC7462851 LOC25489951 LOC25489943 LOC107905215 LOC107892395 LOC107941920 LOC106410203 LOC106371586 LOC106358409 LOC102579610 LOC102603242 LOC102619964 LOC107766026 LOC107765591 LOC107829196
Function* transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b-like transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b TBP-associated factor 4 transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b uncharacterized LOC25489951 transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b-like transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b-like transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b-like transcription initiation factor TFIID subunit 4b transcription initiation factor TFIID subunit 4b
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03082 ATP-dependent chromatin remodeling 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae03013 Nucleocytoplasmic transport 3
tae03250 Viral life cycle - HIV-1 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03040 Spliceosome 2
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
ghi03022 Basal transcription factors 2
ghi03060 Protein export 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03420 Nucleotide excision repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03420 Nucleotide excision repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03022 Basal transcription factors 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta04712 Circadian rhythm - plant 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03022 Basal transcription factors 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta04712 Circadian rhythm - plant 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123172056 123097368 123086110 123448440 100829985 4333214 100278950 8063215 834330 100798514 100797127 100783067 101262209 103848801 103827992 100252311 7497338 7462851 25489951 25489943 107905215 107892395 107941920 106410203 106371586 106358409 102579610 102603242 102619964 107766026 107765591 107829196
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