ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123444878	alpha-glucan phosphorylase, H isozyme-like
hvu-r.1	123452312	alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic
hvu-r.1	123444877	alpha-glucan phosphorylase, H isozyme
tae-r.2	123062617	alpha-glucan phosphorylase, H isozyme-like
tae-r.2	123079772	alpha-glucan phosphorylase, H isozyme-like
tae-r.2	123071433	alpha-glucan phosphorylase, H isozyme-like
bdi-r.1	100827967	alpha-glucan phosphorylase, H isozyme
bdi-r.1	100828538	alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic
osa-u.5	4334171	alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic
osa-u.5	4324810	alpha-glucan phosphorylase, H isozyme
zma-u.5	100285259	uncharacterized LOC100285259
zma-u.5	pho1	starch phosphorylase1
sbi-r.1	110431626	alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic
sbi-r.1	8060105	alpha-glucan phosphorylase, H isozyme
ath-u.5	PHS1	Glycosyl transferase, family 35
ath-u.5	PHS2	alpha-glucan phosphorylase 2
gma-u.5	100818065	alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic
gma-u.5	100789789	alpha-glucan phosphorylase, H isozyme
gma-u.5	100779066	glycogen phosphorylase 1
sly-u.5	101261874	uncharacterized LOC101261874
sly-u.5	101244113	alpha-glucan phosphorylase, H isozyme
sly-u.5	101248295	alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic
bra-r.6	103873279	alpha-glucan phosphorylase 2, cytosolic
bra-r.6	103875081	alpha-glucan phosphorylase 1
bra-r.6	103854138	alpha-glucan phosphorylase 1
vvi-u.5	100245621	alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic
vvi-u.5	100264186	uncharacterized LOC100264186
vvi-u.5	100257811	alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic
ppo-u.5	18097490	uncharacterized LOC18097490
ppo-u.5	7463047	alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic
ppo-u.5	7481498	alpha-glucan phosphorylase, H isozyme
mtr-u.5	11445705	alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic
mtr-u.5	25480821	alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic
mtr-u.5	11443309	glycogen phosphorylase 1
ghi-r.1	107913942	glycogen phosphorylase 1
ghi-r.1	107935941	alpha-glucan phosphorylase, H isozyme
ghi-r.1	107905809	glycogen phosphorylase 1
bna-r.1	106382178	alpha-glucan phosphorylase 1-like
bna-r.1	125580538	alpha-glucan phosphorylase 1-like
bna-r.1	106371101	alpha-glucan phosphorylase 1
sot-r.1	STP-1	alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic-like
sot-r.1	102578187	glycogen phosphorylase 1-like
sot-r.1	102577532	alpha-glucan phosphorylase type H isozyme
cit-r.1	102625638	alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic
cit-r.1	102606996	alpha-glucan phosphorylase 2, cytosolic
nta-r.1	107766371	uncharacterized LOC107766371
nta-r.1	107825407	alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic
nta-r.1	107814807	alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic
cre-r.1	CHLRE_12g552200v5	uncharacterized protein
cre-r.1	CHLRE_07g336950v5	uncharacterized protein

Top 50 coexpressed genes to 123444878 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123444878 (hvu-r.1 coexpression data)

CoexMap"123444878"

[Cytoscape]

Annotation

functional annotation

KEGG

hvg00500 [list] [network] Starch and sucrose metabolism (193 genes)

GO BP

GO:0005980 [list] [network] glycogen catabolic process

(5 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(5514 genes)

IEA

GO MF

GO:0008184 [list] [network] glycogen phosphorylase activity	(5 genes)	IEA
GO:0030170 [list] [network] pyridoxal phosphate binding	(101 genes)	IEA

Protein

XP_044977693.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, plas 3, cyto_nucl 3, cyto_E.R. 3

(predict for XP_044977693.1)

Subcellular
localization
TargetP

other 8

(predict for XP_044977693.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123444878	hvu-r.1 for 123452312	hvu-r.1 for 123444877	tae-r.2 for 123062617	tae-r.2 for 123079772	tae-r.2 for 123071433	bdi-r.1 for 100827967	bdi-r.1 for 100828538	osa-u.5 for 4334171	osa-u.5 for 4324810	zma-u.5 for 100285259	zma-u.5 for pho1	sbi-r.1 for 110431626	sbi-r.1 for 8060105	ath-u.5 for PHS1	ath-u.5 for PHS2	gma-u.5 for 100818065	gma-u.5 for 100789789	gma-u.5 for 100779066	sly-u.5 for 101261874	sly-u.5 for 101244113	sly-u.5 for 101248295	bra-r.6 for 103873279	bra-r.6 for 103875081	bra-r.6 for 103854138	vvi-u.5 for 100245621	vvi-u.5 for 100264186	vvi-u.5 for 100257811	ppo-u.5 for 18097490	ppo-u.5 for 7463047	ppo-u.5 for 7481498	mtr-u.5 for 11445705	mtr-u.5 for 25480821	mtr-u.5 for 11443309	ghi-r.1 for 107913942	ghi-r.1 for 107935941	ghi-r.1 for 107905809	bna-r.1 for 106382178	bna-r.1 for 125580538	bna-r.1 for 106371101	sot-r.1 for STP-1	sot-r.1 for 102578187	sot-r.1 for 102577532	cit-r.1 for 102625638	cit-r.1 for 102606996	nta-r.1 for 107766371	nta-r.1 for 107825407	nta-r.1 for 107814807	cre-r.1 for CHLRE_12g552200v5	cre-r.1 for CHLRE_07g336950v5

Ortholog

Ortholog ID: 1507

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

pho1

PHS1

PHS2

STP-1

Function^*

alpha-glucan phosphorylase, H isozyme-like

alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic