ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	125574983	probable RNA-binding protein ARP1
ath-u.5	AT2G46780	RNA-binding (RRM/RBD/RNP motifs) family protein
gma-u.5	100788899	RNA-binding protein 24
vvi-u.5	100257521	uncharacterized LOC100257521
vvi-u.5	104882246	uncharacterized LOC104882246
ppo-u.5	7478798	uncharacterized LOC7478798
ppo-u.5	7455359	uncharacterized LOC7455359
mtr-u.5	25500626	RNA-binding protein 38

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding

(3852 genes)

IEA

Protein

XP_048634801.1 [sequence] [blastp]
XP_048634802.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_048634801.1)
nucl 10	(predict for XP_048634802.1)

Subcellular
localization
TargetP

other 9, mito 3	(predict for XP_048634801.1)
other 9, mito 3	(predict for XP_048634802.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 125574983	ath-u.5 for AT2G46780	gma-u.5 for 100788899	vvi-u.5 for 100257521	vvi-u.5 for 104882246	ppo-u.5 for 7478798	ppo-u.5 for 7455359	mtr-u.5 for 25500626

Ortholog ID: 11949

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

Symbol

Function^*

probable RNA-binding protein ARP1

RNA-binding (RRM/RBD/RNP motifs) family protein

RNA-binding protein 38

RNA-binding protein 24-B

uncharacterized LOC102620234

RNA-binding protein 24-B

uncharacterized LOC104882246

uncharacterized LOC100257521

uncharacterized LOC7478798

uncharacterized LOC7455359

RNA-binding protein 38

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00510	N-Glycan biosynthesis	2
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03030	DNA replication	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	3
vvi00061	Fatty acid biosynthesis	2
vvi00780	Biotin metabolism	2
vvi01212	Fatty acid metabolism	2
vvi00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8

Expression

Expression pattern

Entrez Gene ID^*

106450476

125574983

103866433

103866305

819291

107911274

107953004

102620234

100786208

104882246

100257521

7478798

7455359

25500626


Species	bna	ath	gma	vvi	ppo	mtr	bdi	hvu	bra	cit	sbi	sly	ghi	osa	sot	nta	cre	tae	zma
Paralog	1	1	1	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 125574983 (bna-r.1 coexpression data)

Top 50 enrichment test to 125574983 (bna-r.1 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 125574983 (bna-r.1 coexpression data)

Top 50 enrichment test to 125574983 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**