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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18105204   transketolase, chloroplastic 
 ppo-r.4   18105204   transketolase, chloroplastic 
 ppo-u.5   7453964   transketolase, chloroplastic 
 gma-u.5   100805786   transketolase, chloroplastic 
 gma-u.5   100818028   transketolase, chloroplastic 
 gma-u.5   100781676   transketolase, chloroplastic 
 mtr-u.5   11423341   transketolase, chloroplastic 
 mtr-u.5   11424367   transketolase, chloroplastic 
 ath-u.5   AT2G45290   Transketolase 
 ath-u.5   AT3G60750   Transketolase 
 bra-r.6   103862864   transketolase-1, chloroplastic 
 bra-r.6   103841917   transketolase-1, chloroplastic 
 vvi-u.5   100262551   transketolase, chloroplastic 
 vvi-u.5   100248004   transketolase, chloroplastic 
 ghi-r.1   107952895   transketolase, chloroplastic 
 ghi-r.1   107954570   transketolase, chloroplastic 
 ghi-r.1   107911586   transketolase, chloroplastic 
 bna-r.1   106450752   transketolase-2, chloroplastic 
 bna-r.1   106414846   transketolase-1, chloroplastic-like 
 bna-r.1   106414826   transketolase-1, chloroplastic-like 
 cit-r.1   102622121   transketolase, chloroplastic 
 sly-u.5   101251315   transketolase, chloroplastic-like 
 sly-u.5   101265735   transketolase, chloroplastic-like 
 sly-u.5   101245299   transketolase, chloroplastic 
 sot-r.1   102588555   transketolase, chloroplastic-like 
 sot-r.1   TK   transketolase 
 sot-r.1   102603108   transketolase, chloroplastic-like 
 nta-r.1   107785488   transketolase, chloroplastic 
 osa-u.5   4335330   transketolase, chloroplastic 
 osa-u.5   4340025   transketolase, chloroplastic 
 zma-u.5   100279513   uncharacterized LOC100279513 
 zma-u.5   103646666   transketolase, chloroplastic-like 
 zma-u.5   103640190   transketolase, chloroplastic 
 tae-r.2   123088174   transketolase, chloroplastic 
 tae-r.2   123051323   transketolase, chloroplastic 
 tae-r.2   123150036   transketolase, chloroplastic 
 hvu-r.1   123429329   transketolase, chloroplastic-like 
 hvu-r.1   123411953   transketolase, chloroplastic 
 sbi-r.1   8068395   transketolase, chloroplastic 
 sbi-r.1   8072707   transketolase, chloroplastic 
 sbi-r.1   8069074   transketolase, chloroplastic 
 bdi-r.1   100841910   transketolase, chloroplastic 
 bdi-r.1   100837200   transketolase, chloroplastic 
 cre-r.1   CHLRE_02g080200v5   uncharacterized protein 

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Top 50 coexpressed genes to 18105204 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18105204 (ppo-u.5 coexpression data)

CoexMap"18105204"


ppoLOC18105204 | Entrez gene ID : 18105204    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 2 2 2 2 3 3 1 3 3 1 2 3 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00030 [list] [network] Pentose phosphate pathway (71 genes)
pop00710 [list] [network] Carbon fixation by Calvin cycle (101 genes)
pop01200 [list] [network] Carbon metabolism (347 genes)
pop01230 [list] [network] Biosynthesis of amino acids (287 genes)
GO BP
GO:0006098 [list] [network] pentose-phosphate shunt  (32 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (1141 genes)  IEA  
GO MF
GO:0004802 [list] [network] transketolase activity  (3 genes)  IEA  
Protein XP_006375308.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  cyto_mito 2,  nucl 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_006375308.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006375308.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18105204
ppo-r.4
for
18105204
ppo-u.5
for
7453964
gma-u.5
for
100805786
gma-u.5
for
100818028
gma-u.5
for
100781676
mtr-u.5
for
11423341
mtr-u.5
for
11424367
ath-u.5
for
AT2G45290
ath-u.5
for
AT3G60750
bra-r.6
for
103862864
bra-r.6
for
103841917
vvi-u.5
for
100262551
vvi-u.5
for
100248004
ghi-r.1
for
107952895
ghi-r.1
for
107954570
ghi-r.1
for
107911586
bna-r.1
for
106450752
bna-r.1
for
106414846
bna-r.1
for
106414826
cit-r.1
for
102622121
sly-u.5
for
101251315
sly-u.5
for
101265735
sly-u.5
for
101245299
sot-r.1
for
102588555
sot-r.1
for
TK
sot-r.1
for
102603108
nta-r.1
for
107785488
osa-u.5
for
4335330
osa-u.5
for
4340025
zma-u.5
for
100279513
zma-u.5
for
103646666
zma-u.5
for
103640190
tae-r.2
for
123088174
tae-r.2
for
123051323
tae-r.2
for
123150036
hvu-r.1
for
123429329
hvu-r.1
for
123411953
sbi-r.1
for
8068395
sbi-r.1
for
8072707
sbi-r.1
for
8069074
bdi-r.1
for
100841910
bdi-r.1
for
100837200
cre-r.1
for
CHLRE_02g080200v5


Ortholog ID: 2545
Species ppo ppo gma gma gma mtr mtr ath ath bra bra vvi vvi ghi ghi ghi bna bna bna cit sly sly sly sot sot sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC18105204 LOC7453964 LOC100805786 LOC100818028 LOC100781676 LOC11423341 LOC11424367 AT2G45290 AT3G60750 LOC103862864 LOC103841917 LOC100262551 LOC100248004 LOC107954570 LOC107941756 LOC121210881 LOC106450752 LOC106396106 LOC111215158 LOC102622121 LOC101251315 LOC101265735 LOC101245299 LOC102588555 TK LOC102603108 LOC107785488 LOC107797391 LOC4335330 LOC4340025 LOC100279513 LOC103646666 LOC103640190 LOC123088174 LOC123051323 LOC123165497 LOC123429329 LOC123411953 LOC8068395 LOC8072707 LOC8085774 LOC100841910 LOC100837200 CHLRE_02g080200v5
Function* transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic Transketolase Transketolase transketolase-1, chloroplastic transketolase-1, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase-2, chloroplastic transketolase-2, chloroplastic transketolase-1, chloroplastic-like transketolase, chloroplastic transketolase, chloroplastic-like transketolase, chloroplastic-like transketolase, chloroplastic transketolase, chloroplastic-like transketolase transketolase, chloroplastic-like transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic uncharacterized LOC100279513 transketolase, chloroplastic-like transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic-like transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 8
ppo01230 Biosynthesis of amino acids 8
ppo01200 Carbon metabolism 7
ppo00270 Cysteine and methionine metabolism 6
ppo00260 Glycine, serine and threonine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 9
ppo00710 Carbon fixation by Calvin cycle 6
ppo01230 Biosynthesis of amino acids 6
ppo00030 Pentose phosphate pathway 4
ppo00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 9
gma00710 Carbon fixation by Calvin cycle 8
gma00030 Pentose phosphate pathway 3
gma00195 Photosynthesis 3
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 16
gma01230 Biosynthesis of amino acids 11
gma00030 Pentose phosphate pathway 9
gma00710 Carbon fixation by Calvin cycle 8
gma00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 11
gma00710 Carbon fixation by Calvin cycle 9
gma00630 Glyoxylate and dicarboxylate metabolism 4
gma00030 Pentose phosphate pathway 3
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr01200 Carbon metabolism 3
mtr00190 Oxidative phosphorylation 2
mtr00195 Photosynthesis 2
mtr00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 9
mtr01200 Carbon metabolism 8
mtr00010 Glycolysis / Gluconeogenesis 4
mtr00030 Pentose phosphate pathway 4
mtr01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 6
ath01200 Carbon metabolism 4
ath00030 Pentose phosphate pathway 3
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
ath01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 10
ath01230 Biosynthesis of amino acids 7
ath00010 Glycolysis / Gluconeogenesis 6
ath00620 Pyruvate metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 8
bra00030 Pentose phosphate pathway 5
bra00010 Glycolysis / Gluconeogenesis 4
bra00260 Glycine, serine and threonine metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 11
bra01230 Biosynthesis of amino acids 9
bra00710 Carbon fixation by Calvin cycle 7
bra00630 Glyoxylate and dicarboxylate metabolism 5
bra00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 3
vvi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 7
ghi00710 Carbon fixation by Calvin cycle 7
ghi01200 Carbon metabolism 7
ghi01230 Biosynthesis of amino acids 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 7
ghi00710 Carbon fixation by Calvin cycle 7
ghi01200 Carbon metabolism 7
ghi01230 Biosynthesis of amino acids 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 7
ghi00710 Carbon fixation by Calvin cycle 7
ghi01200 Carbon metabolism 7
ghi01230 Biosynthesis of amino acids 7
ghi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 8
bna00030 Pentose phosphate pathway 6
bna00710 Carbon fixation by Calvin cycle 6
bna01230 Biosynthesis of amino acids 6
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 8
bna00030 Pentose phosphate pathway 6
bna00710 Carbon fixation by Calvin cycle 6
bna01230 Biosynthesis of amino acids 6
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 10
bna00030 Pentose phosphate pathway 6
bna00710 Carbon fixation by Calvin cycle 6
bna01230 Biosynthesis of amino acids 6
bna00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00030 Pentose phosphate pathway 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 9
sly01230 Biosynthesis of amino acids 6
sly00190 Oxidative phosphorylation 6
sly00710 Carbon fixation by Calvin cycle 5
sly00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 9
sly00710 Carbon fixation by Calvin cycle 7
sly00195 Photosynthesis 6
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot01230 Biosynthesis of amino acids 7
sot00010 Glycolysis / Gluconeogenesis 4
sot00030 Pentose phosphate pathway 4
sot00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot01230 Biosynthesis of amino acids 7
sot00710 Carbon fixation by Calvin cycle 6
sot00010 Glycolysis / Gluconeogenesis 4
sot00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 4
nta01200 Carbon metabolism 4
nta01230 Biosynthesis of amino acids 4
nta00710 Carbon fixation by Calvin cycle 3
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 8
nta01200 Carbon metabolism 7
nta00030 Pentose phosphate pathway 5
nta00710 Carbon fixation by Calvin cycle 5
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 6
osa01200 Carbon metabolism 6
osa01230 Biosynthesis of amino acids 4
osa00710 Carbon fixation by Calvin cycle 3
osa00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa01230 Biosynthesis of amino acids 6
osa00710 Carbon fixation by Calvin cycle 5
osa00630 Glyoxylate and dicarboxylate metabolism 4
osa00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 7
zma01200 Carbon metabolism 7
zma01230 Biosynthesis of amino acids 6
zma00010 Glycolysis / Gluconeogenesis 5
zma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 4
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
zma00030 Pentose phosphate pathway 3
zma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 12
tae01200 Carbon metabolism 11
tae00710 Carbon fixation by Calvin cycle 8
tae00920 Sulfur metabolism 6
tae01320 Sulfur cycle 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 11
tae01200 Carbon metabolism 7
tae00710 Carbon fixation by Calvin cycle 6
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
tae00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00195 Photosynthesis 2
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00030 Pentose phosphate pathway 4
sbi00710 Carbon fixation by Calvin cycle 4
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 10
sbi00785 Lipoic acid metabolism 5
sbi00030 Pentose phosphate pathway 5
sbi00010 Glycolysis / Gluconeogenesis 4
sbi00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi04016 MAPK signaling pathway - plant 3
sbi04075 Plant hormone signal transduction 3
sbi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 7
bdi00710 Carbon fixation by Calvin cycle 5
bdi01230 Biosynthesis of amino acids 5
bdi00030 Pentose phosphate pathway 3
bdi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00710 Carbon fixation by Calvin cycle 8
cre01200 Carbon metabolism 8
cre00195 Photosynthesis 4
cre00630 Glyoxylate and dicarboxylate metabolism 3
cre00190 Oxidative phosphorylation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18105204 7453964 100805786 100818028 100781676 11423341 11424367 819137 825246 103862864 103841917 100262551 100248004 107954570 107941756 121210881 106450752 106396106 111215158 102622121 101251315 101265735 101245299 102588555 102591899 102603108 107785488 107797391 4335330 4340025 100279513 103646666 103640190 123088174 123051323 123165497 123429329 123411953 8068395 8072707 8085774 100841910 100837200 5727287
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