ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	25486358	coatomer subunit epsilon-2
mtr-r.5	25486358	coatomer subunit epsilon-2
gma-u.5	COPE1	epsilon1-COP
gma-u.5	COPE2	epsilon2-COP
ppo-u.5	7485150	coatomer subunit epsilon-1
ath-u.5	AT2G34840	Coatomer epsilon subunit
ath-u.5	AT1G30630	Coatomer epsilon subunit
vvi-u.5	100264563	coatomer subunit epsilon-like
sly-u.5	101245110	coatomer subunit epsilon-1
sly-u.5	101266095	coatomer subunit epsilon-1
osa-u.5	4336967	coatomer subunit epsilon-1-like
zma-u.5	100194321	Coatomer subunit epsilon-2
zma-u.5	541811	coatomer protein 2

functional annotation

KEGG

GO BP

GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport	(27 genes)	IEA
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	(28 genes)	IEA
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport	(64 genes)	IEA

GO CC

GO:0030126 [list] [network] COPI vesicle coat

(16 genes)

IEA

GO MF

GO:0005198 [list] [network] structural molecule activity	(535 genes)	IEA
GO:0005515 [list] [network] protein binding	(5045 genes)	IEA

Protein

XP_013463088.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, extr 3, nucl 2, cyto 1

(predict for XP_013463088.1)

Subcellular
localization
TargetP

other 4

(predict for XP_013463088.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25486358	mtr-r.5 for 25486358	gma-u.5 for COPE1	gma-u.5 for COPE2	ppo-u.5 for 7485150	ath-u.5 for AT2G34840	ath-u.5 for AT1G30630	vvi-u.5 for 100264563	sly-u.5 for 101245110	sly-u.5 for 101266095	osa-u.5 for 4336967	zma-u.5 for 100194321	zma-u.5 for 541811

Ortholog ID: 4881

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC25486358

COPE1

COPE2

Function^*

coatomer subunit epsilon-2

epsilon1-COP

epsilon2-COP

coatomer subunit epsilon-1

Coatomer epsilon subunit

coatomer subunit epsilon-2

coatomer subunit epsilon-1

coatomer subunit epsilon-like

coatomer subunit epsilon-1

coatomer subunit epsilon-2

coatomer subunit epsilon-1

coatomer subunit epsilon-1-like

coatomer subunit epsilon-1

coatomer subunit epsilon-1-like

Coatomer subunit epsilon-2

coatomer protein 2

coatomer subunit epsilon-1

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2
mtr00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	4
ppo00040	Pentose and glucuronate interconversions	2
ppo00053	Ascorbate and aldarate metabolism	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath04130	SNARE interactions in vesicular transport	2
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	2
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2
bra00010	Glycolysis / Gluconeogenesis	2
bra00230	Purine metabolism	2
bra01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	5
bra03015	mRNA surveillance pathway	2
bra04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3
vvi00510	N-Glycan biosynthesis	2
vvi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	3
cit04145	Phagosome	2
cit00541	Biosynthesis of various nucleotide sugars	2
cit01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	4
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	3
sly04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	5
sot03060	Protein export	2
sot04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04145	Phagosome	5
sot04517	IgSF CAM signaling	5
sot04814	Motor proteins	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta00190	Oxidative phosphorylation	3
nta04145	Phagosome	3
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta00190	Oxidative phosphorylation	3
nta04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	3
osa01200	Carbon metabolism	3
osa00020	Citrate cycle (TCA cycle)	2
osa00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	5
zma00061	Fatty acid biosynthesis	4
zma01212	Fatty acid metabolism	4
zma00780	Biotin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu00510	N-Glycan biosynthesis	2
hvu03015	mRNA surveillance pathway	2
hvu04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	3
sbi04120	Ubiquitin mediated proteolysis	2
sbi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	4
bdi04142	Lysosome	2
bdi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	5
cre04145	Phagosome	5
cre00514	Other types of O-glycan biosynthesis	4
cre00520	Amino sugar and nucleotide sugar metabolism	3
cre01250	Biosynthesis of nucleotide sugars	3

Expression

Expression pattern

Entrez Gene ID^*

25486358

547468

547992

7485150

839943

818049

103865360

103840372

100264563

107906332

107941169

106402825

106367256

102629999

101266095

101245110

102581548

102582432

107803985

107785121

4336967

100194321

541811

123046466

123190203

123427630

8072329

100834675

5718666

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 25486358 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25486358 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	2	1	2	1	2	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25486358 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25486358 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**