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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4342698   polygalacturonase 
 osa-r.6   4342698   polygalacturonase 
 osa-m.8   4342698   polygalacturonase 
 zma-u.5   103644218   polygalacturonase ADPG1 
 zma-u.5   103644217   polygalacturonase 
 ath-u.5   PGAZAT   polygalacturonase ADPG2-like protein 
 ath-u.5   QRT2   Pectin lyase-like superfamily protein 
 gma-u.5   100819195   probable polygalacturonase At1g80170 
 sly-u.5   101264436   probable polygalacturonase At1g80170 
 sly-u.5   PG2   polygalacturonase-2a 
 vvi-u.5   100255477   polygalacturonase 
 vvi-u.5   100257239   polygalacturonase 
 ppo-u.5   7478117   probable polygalacturonase At1g80170 
 mtr-u.5   11433078   probable polygalacturonase At1g80170 

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Top 50 coexpressed genes to 4342698 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4342698 (osa-u.5 coexpression data)

CoexMap"4342698"


osaLOC4342698 | Entrez gene ID : 4342698    
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 2 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa00040 [list] [network] Pentose and glucuronate interconversions (76 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (757 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (43 genes)  IEA  
Protein XP_025882464.1 [sequence] [blastp]
XP_025882466.1 [sequence] [blastp]
XP_025882469.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  extr 2,  cyto 1,  cysk_nucl 1  (predict for XP_025882464.1)
chlo 4,  nucl 2,  extr 2,  cyto 1,  cysk_nucl 1  (predict for XP_025882466.1)
cyto 5,  nucl 4,  extr 1,  cysk 1  (predict for XP_025882469.1)
Subcellular
localization
TargetP
other 7  (predict for XP_025882464.1)
other 7  (predict for XP_025882466.1)
other 8  (predict for XP_025882469.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4342698
osa-r.6
for
4342698
osa-m.8
for
4342698
zma-u.5
for
103644218
zma-u.5
for
103644217
ath-u.5
for
PGAZAT
ath-u.5
for
QRT2
gma-u.5
for
100819195
sly-u.5
for
101264436
sly-u.5
for
PG2
vvi-u.5
for
100255477
vvi-u.5
for
100257239
ppo-u.5
for
7478117
mtr-u.5
for
11433078


Ortholog ID: 458
Species osa bdi zma zma ath sly sly vvi ppo mtr ghi sot sot cit nta nta
Symbol LOC4339483 LOC100829282 LOC103644217 LOC103644218 QRT2 PG2 LOC101264436 LOC100243033 LOC7478117 LOC11433078 LOC107950651 LOC102594305 LOC102585179 PG LOC107824130 LOC107779855
Function* probable polygalacturonase At1g80170 uncharacterized LOC100829282 polygalacturonase polygalacturonase ADPG1 Pectin lyase-like superfamily protein polygalacturonase-2a probable polygalacturonase At1g80170 polygalacturonase probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 polygalacturonase QRT2 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 polygalacturonase polygalacturonase-2-like probable polygalacturonase At1g80170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 4
ath04981 Folate transport and metabolism 4
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
ath00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 4
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
sot00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 3
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4339483 100829282 103644217 103644218 819988 544051 101264436 100243033 7478117 11433078 107950651 102594305 102585179 102578026 107824130 107779855
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