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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g302750v5   uncharacterized protein 
 ath-u.5   AT3G15610   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   AT1G15470   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   AT1G52730   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100818422   serine-threonine kinase receptor-associated protein 
 gma-u.5   100782712   serine-threonine kinase receptor-associated protein 
 sly-u.5   101253366   uncharacterized LOC101253366 
 osa-u.5   4328675   uncharacterized LOC4328675 
 osa-u.5   4341446   uncharacterized LOC4341446 
 zma-u.5   103629787   serine-threonine kinase receptor-associated protein-like 
 zma-u.5   100274502   uncharacterized LOC100274502 
 bra-r.6   103872342   serine-threonine kinase receptor-associated protein 
 bra-r.6   103868481   serine-threonine kinase receptor-associated protein 
 vvi-u.5   100260049   uncharacterized LOC100260049 
 vvi-u.5   100261048   uncharacterized LOC100261048 
 ppo-u.5   7478372   uncharacterized LOC7478372 
 ppo-u.5   7490969   uncharacterized LOC7490969 
 mtr-u.5   25486758   serine-threonine kinase receptor-associated protein 
 tae-r.2   123156840   serine-threonine kinase receptor-associated protein 
 tae-r.2   123103614   serine-threonine kinase receptor-associated protein 
 tae-r.2   123111831   serine-threonine kinase receptor-associated protein 
 hvu-r.1   123413342   serine-threonine kinase receptor-associated protein-like 
 hvu-r.1   123395389   serine-threonine kinase receptor-associated protein-like 
 ghi-r.1   107962641   serine-threonine kinase receptor-associated protein 
 ghi-r.1   107949560   serine-threonine kinase receptor-associated protein 
 ghi-r.1   107913916   serine-threonine kinase receptor-associated protein 
 bna-r.1   125609501   serine-threonine kinase receptor-associated protein-like 
 bna-r.1   125598501   serine-threonine kinase receptor-associated protein-like 
 bna-r.1   125597641   serine-threonine kinase receptor-associated protein-like 
 sbi-r.1   8082936   serine-threonine kinase receptor-associated protein 
 sbi-r.1   8082245   serine-threonine kinase receptor-associated protein 
 sot-r.1   102586216   serine-threonine kinase receptor-associated protein-like 
 cit-r.1   102619037   uncharacterized LOC102619037 
 cit-r.1   102610385   uncharacterized LOC102610385 
 bdi-r.1   100845468   serine-threonine kinase receptor-associated protein 
 nta-r.1   107776117   uncharacterized LOC107776117 
 nta-r.1   107793048   uncharacterized LOC107793048 
 nta-r.1   107778059   uncharacterized LOC107778059 

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Top 50 coexpressed genes to CHLRE_06g302750v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g302750v5 (cre-r.1 coexpression data)

CoexMap"5716942"


creCHLRE_06g302750v5 | Entrez gene ID : 5716942      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 3 2 1 2 2 2 2 2 1 3 2 3 3 2 1 2 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000387 [list] [network] spliceosomal snRNP assembly  (16 genes)  IEA  
GO CC
GO:0032797 [list] [network] SMN complex  (2 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_001691265.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 3,  cyto_mito 3,  mito_plas 3  (predict for XP_001691265.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_001691265.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g302750v5
ath-u.5
for
AT3G15610
ath-u.5
for
AT1G15470
ath-u.5
for
AT1G52730
gma-u.5
for
100818422
gma-u.5
for
100782712
sly-u.5
for
101253366
osa-u.5
for
4328675
osa-u.5
for
4341446
zma-u.5
for
103629787
zma-u.5
for
100274502
bra-r.6
for
103872342
bra-r.6
for
103868481
vvi-u.5
for
100260049
vvi-u.5
for
100261048
ppo-u.5
for
7478372
ppo-u.5
for
7490969
mtr-u.5
for
25486758
tae-r.2
for
123156840
tae-r.2
for
123103614
tae-r.2
for
123111831
hvu-r.1
for
123413342
hvu-r.1
for
123395389
ghi-r.1
for
107962641
ghi-r.1
for
107949560
ghi-r.1
for
107913916
bna-r.1
for
125609501
bna-r.1
for
125598501
bna-r.1
for
125597641
sbi-r.1
for
8082936
sbi-r.1
for
8082245
sot-r.1
for
102586216
cit-r.1
for
102619037
cit-r.1
for
102610385
bdi-r.1
for
100845468
nta-r.1
for
107776117
nta-r.1
for
107793048
nta-r.1
for
107778059


Ortholog ID: 2813
Species cre ath ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sot cit cit bdi nta nta nta
Symbol CHLRE_06g302750v5 AT3G15610 AT1G15470 AT1G52730 LOC100818422 LOC100782712 LOC101253366 LOC4328675 LOC4341446 LOC103629787 LOC100274502 LOC103872342 LOC103868481 LOC100260049 LOC100261048 LOC7478372 LOC7490969 LOC25486758 LOC123156840 LOC123148136 LOC123165014 LOC123413342 LOC123395389 LOC107962641 LOC107907437 LOC107901194 LOC125609501 LOC125598501 LOC106402590 LOC8082936 LOC8082245 LOC102586216 LOC102619037 LOC102610385 LOC100845468 LOC107776117 LOC107793048 LOC107778059
Function* uncharacterized protein Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein uncharacterized LOC101253366 uncharacterized LOC4328675 uncharacterized LOC4341446 serine-threonine kinase receptor-associated protein-like uncharacterized LOC100274502 serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein uncharacterized LOC100260049 uncharacterized LOC100261048 uncharacterized LOC7478372 uncharacterized LOC7490969 serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein-like serine-threonine kinase receptor-associated protein-like serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein-like serine-threonine kinase receptor-associated protein-like serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein-like uncharacterized LOC102619037 uncharacterized LOC102610385 serine-threonine kinase receptor-associated protein uncharacterized LOC107776117 uncharacterized LOC107793048 uncharacterized LOC107778059
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 3
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 7
osa00020 Citrate cycle (TCA cycle) 4
osa01200 Carbon metabolism 4
osa00620 Pyruvate metabolism 3
osa00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra01230 Biosynthesis of amino acids 2
bra00020 Citrate cycle (TCA cycle) 2
bra01200 Carbon metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 8
bra03040 Spliceosome 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03420 Nucleotide excision repair 3
mtr03010 Ribosome 3
mtr03020 RNA polymerase 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 6
hvu04145 Phagosome 3
hvu01230 Biosynthesis of amino acids 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00640 Propanoate metabolism 4
ghi01200 Carbon metabolism 4
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 6
ghi01200 Carbon metabolism 6
ghi00640 Propanoate metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00640 Propanoate metabolism 4
ghi01200 Carbon metabolism 4
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 7
cit00190 Oxidative phosphorylation 4
cit04145 Phagosome 4
cit04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716942 820803 838117 841706 100818422 100782712 101253366 4328675 4341446 103629787 100274502 103872342 103868481 100260049 100261048 7478372 7490969 25486758 123156840 123148136 123165014 123413342 123395389 107962641 107907437 107901194 125609501 125598501 106402590 8082936 8082245 102586216 102619037 102610385 100845468 107776117 107793048 107778059
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