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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7490969   uncharacterized LOC7490969 
 ppo-r.4   7490969   uncharacterized LOC7490969 
 ppo-m.4   7490969   uncharacterized LOC7490969 
 ppo-u.5   7478372   uncharacterized LOC7478372 
 gma-u.5   100818422   serine-threonine kinase receptor-associated protein 
 gma-u.5   100782712   serine-threonine kinase receptor-associated protein 
 mtr-u.5   25486758   serine-threonine kinase receptor-associated protein 
 ath-u.5   AT3G15610   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   AT1G15470   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   AT1G52730   Transducin/WD40 repeat-like superfamily protein 
 vvi-u.5   100260049   uncharacterized LOC100260049 
 vvi-u.5   100261048   uncharacterized LOC100261048 
 sly-u.5   101253366   uncharacterized LOC101253366 
 osa-u.5   4328675   uncharacterized LOC4328675 
 osa-u.5   4341446   uncharacterized LOC4341446 
 zma-u.5   100274502   uncharacterized LOC100274502 
 zma-u.5   103629787   serine-threonine kinase receptor-associated protein-like 

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Top 50 coexpressed genes to 7490969 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7490969 (ppo-u.5 coexpression data)

CoexMap"7490969"


ppoLOC7490969 | Entrez gene ID : 7490969    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 3 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000387 [list] [network] spliceosomal snRNP assembly  (28 genes)  IEA  
GO CC
GO:0032797 [list] [network] SMN complex  (4 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002298116.1 [sequence] [blastp]
XP_024448910.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  pero 1,  cysk 1  (predict for XP_002298116.1)
nucl 6,  chlo 1,  cyto 1  (predict for XP_024448910.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002298116.1)
other 6  (predict for XP_024448910.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7490969

.
ppo-r.4
for
7490969

.
ppo-m.4
for
7490969

.
ppo-u.5
for
7478372

.
gma-u.5
for
100818422

.
gma-u.5
for
100782712

.
mtr-u.5
for
25486758

.
ath-u.5
for
AT3G15610

.
ath-u.5
for
AT1G15470

.
ath-u.5
for
AT1G52730

.
vvi-u.5
for
100260049

.
vvi-u.5
for
100261048

.
sly-u.5
for
101253366

.
osa-u.5
for
4328675

.
osa-u.5
for
4341446

.
zma-u.5
for
100274502

.
zma-u.5
for
103629787

.


Ortholog ID: 2813
Species ath ath gma gma sly osa osa zma zma bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit cit bdi nta nta
Symbol AT3G15610 AT1G15470 LOC100782712 LOC100818422 LOC101253366 LOC4341446 LOC4328675 LOC100274502 LOC103629787 LOC103868481 LOC100261048 LOC100260049 LOC7478372 LOC7490969 LOC25486758 LOC123165014 LOC123148136 LOC123395389 LOC123413342 LOC107901194 LOC107962641 LOC125609501 LOC106402590 CHLRE_06g302750v5 LOC8082245 LOC8082936 LOC102586216 LOC102619037 LOC102610385 LOC100845468 LOC107778059 LOC107776117
Function* Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein uncharacterized LOC101253366 uncharacterized LOC4341446 uncharacterized LOC4328675 uncharacterized LOC100274502 serine-threonine kinase receptor-associated protein-like serine-threonine kinase receptor-associated protein uncharacterized LOC100261048 uncharacterized LOC100260049 uncharacterized LOC7478372 uncharacterized LOC7490969 serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein-like serine-threonine kinase receptor-associated protein-like serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein-like serine-threonine kinase receptor-associated protein uncharacterized protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein serine-threonine kinase receptor-associated protein-like uncharacterized LOC102619037 uncharacterized LOC102610385 serine-threonine kinase receptor-associated protein uncharacterized LOC107778059 uncharacterized LOC107776117
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 3
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 7
osa00020 Citrate cycle (TCA cycle) 4
osa01200 Carbon metabolism 4
osa00620 Pyruvate metabolism 3
osa00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 8
bra03040 Spliceosome 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03420 Nucleotide excision repair 3
mtr03010 Ribosome 3
mtr03020 RNA polymerase 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 6
hvu04145 Phagosome 3
hvu01230 Biosynthesis of amino acids 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00640 Propanoate metabolism 4
ghi01200 Carbon metabolism 4
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00640 Propanoate metabolism 4
ghi01200 Carbon metabolism 4
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 7
cit00190 Oxidative phosphorylation 4
cit04145 Phagosome 4
cit04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820803 838117 100782712 100818422 101253366 4341446 4328675 100274502 103629787 103868481 100261048 100260049 7478372 7490969 25486758 123165014 123148136 123395389 123413342 107901194 107962641 125609501 106402590 5716942 8082245 8082936 102586216 102619037 102610385 100845468 107778059 107776117
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