Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_17g741850v5   uncharacterized protein 
 ath-u.5   AT3G20890   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   AT5G66010   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100819738   heterogeneous nuclear ribonucleoprotein H3 
 gma-u.5   100816391   heterogeneous nuclear ribonucleoprotein H3 
 gma-u.5   100805177   G-rich sequence factor 1-like 
 sly-u.5   101252375   uncharacterized LOC101252375 
 sly-u.5   101264406   uncharacterized LOC101264406 
 sly-u.5   101249521   uncharacterized LOC101249521 
 osa-u.5   4349693   uncharacterized LOC4349693 
 osa-u.5   4351412   uncharacterized LOC4351412 
 zma-u.5   103636375   G-rich sequence factor 1 
 zma-u.5   100282450   RNA binding protein 
 zma-u.5   100282455   uncharacterized LOC100282455 
 vvi-u.5   100247294   uncharacterized LOC100247294 
 vvi-u.5   100251936   uncharacterized LOC100251936 
 ppo-u.5   7480460   uncharacterized LOC7480460 
 ppo-u.5   7482324   uncharacterized LOC7482324 
 ppo-u.5   7480048   uncharacterized LOC7480048 
 mtr-u.5   11443549   heterogeneous nuclear ribonucleoprotein H3 
 mtr-u.5   11439103   G-rich sequence factor 1 

close


Top 50 coexpressed genes to CHLRE_17g741850v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_17g741850v5 (cre-r.1 coexpression data)

CoexMap"5726664"


creCHLRE_17g741850v5 | Entrez gene ID : 5726664      
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 2 3 3 2 3 2 3 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (370 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_001701092.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2  (predict for XP_001701092.1)
Subcellular
localization
TargetP
other 9  (predict for XP_001701092.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_17g741850v5

.
ath-u.5
for
AT3G20890

.
ath-u.5
for
AT5G66010

.
gma-u.5
for
100819738

.
gma-u.5
for
100816391

.
gma-u.5
for
100805177

.
sly-u.5
for
101252375

.
sly-u.5
for
101264406

.
sly-u.5
for
101249521

.
osa-u.5
for
4349693

.
osa-u.5
for
4351412

.
zma-u.5
for
103636375

.
zma-u.5
for
100282450

.
zma-u.5
for
100282455

.
vvi-u.5
for
100247294

.
vvi-u.5
for
100251936

.
ppo-u.5
for
7480460

.
ppo-u.5
for
7482324

.
ppo-u.5
for
7480048

.
mtr-u.5
for
11443549

.
mtr-u.5
for
11439103

.


Ortholog ID: 3228
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol AT5G66010 AT3G20890 LOC100816391 LOC100819738 LOC101264406 LOC101252375 LOC4351412 LOC4349693 LOC100282450 LOC100282455 LOC103869220 LOC103859876 LOC100251936 LOC100247294 LOC7480460 LOC7482324 LOC11443549 LOC11439103 LOC123131720 LOC123135568 LOC123401413 LOC107925925 LOC107940528 LOC125603090 LOC111205396 CHLRE_17g741850v5 LOC110430182 LOC102591282 LOC102604361 LOC102628397 LOC102629250 LOC100845704 LOC107800593 LOC107812664
Function* RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein heterogeneous nuclear ribonucleoprotein H3 heterogeneous nuclear ribonucleoprotein H3 uncharacterized LOC101264406 uncharacterized LOC101252375 uncharacterized LOC4351412 uncharacterized LOC4349693 RNA binding protein uncharacterized LOC100282455 heterogeneous nuclear ribonucleoprotein H3 heterogeneous nuclear ribonucleoprotein H3 uncharacterized LOC100251936 uncharacterized LOC100247294 uncharacterized LOC7480460 uncharacterized LOC7482324 heterogeneous nuclear ribonucleoprotein H3 G-rich sequence factor 1 heterogeneous nuclear ribonucleoprotein H3 G-rich sequence factor 1 G-rich sequence factor 1 heterogeneous nuclear ribonucleoprotein F heterogeneous nuclear ribonucleoprotein F heterogeneous nuclear ribonucleoprotein H2-like heterogeneous nuclear ribonucleoprotein H3-like uncharacterized protein G-rich sequence factor 1-like heterogeneous nuclear ribonucleoprotein H2-like heterogeneous nuclear ribonucleoprotein H2 uncharacterized LOC102628397 uncharacterized LOC102629250 heterogeneous nuclear ribonucleoprotein F uncharacterized LOC107800593 uncharacterized LOC107812664
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 8
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03015 mRNA surveillance pathway 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03040 Spliceosome 4
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03420 Nucleotide excision repair 2
bra03040 Spliceosome 2
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 2
vvi04146 Peroxisome 2
vvi00790 Folate biosynthesis 2
vvi01240 Biosynthesis of cofactors 2
vvi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo04120 Ubiquitin mediated proteolysis 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03082 ATP-dependent chromatin remodeling 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 6
tae03010 Ribosome 5
tae04141 Protein processing in endoplasmic reticulum 3
tae00640 Propanoate metabolism 3
tae00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836731 821638 100816391 100819738 101264406 101252375 4351412 4349693 100282450 100282455 103869220 103859876 100251936 100247294 7480460 7482324 11443549 11439103 123131720 123135568 123401413 107925925 107940528 125603090 111205396 5726664 110430182 102591282 102604361 102628397 102629250 100845704 107800593 107812664
The preparation time of this page was 0.3 [sec].