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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8061087   probable polygalacturonase At1g80170 
 zma-u.5   103644218   polygalacturonase ADPG1 
 zma-u.5   103644217   polygalacturonase 
 osa-u.5   4342698   polygalacturonase 
 tae-r.2   123143035   probable polygalacturonase At1g80170 
 hvu-r.1   123448060   probable polygalacturonase At1g80170 
 bdi-r.1   100829282   uncharacterized LOC100829282 
 ath-u.5   PGAZAT   polygalacturonase ADPG2-like protein 
 ath-u.5   QRT2   Pectin lyase-like superfamily protein 
 gma-u.5   100819195   probable polygalacturonase At1g80170 
 sly-u.5   101264436   probable polygalacturonase At1g80170 
 sly-u.5   PG2   polygalacturonase-2a 
 bra-r.6   103870621   polygalacturonase QRT2-like 
 bra-r.6   103830105   polygalacturonase ADPG1 
 bra-r.6   103830423   probable polygalacturonase At1g80170 
 vvi-u.5   100255477   polygalacturonase 
 vvi-u.5   100243033   polygalacturonase 
 vvi-u.5   100250296   polygalacturonase 
 ppo-u.5   7468975   polygalacturonase 
 ppo-u.5   7473629   polygalacturonase 
 mtr-u.5   11444474   polygalacturonase 
 ghi-r.1   107918834   polygalacturonase QRT2 
 sot-r.1   102594305   probable polygalacturonase At1g80170 
 cit-r.1   102609776   polygalacturonase 
 nta-r.1   107778498   putative polygalacturonase At1g80170 
 nta-r.1   142177610   polygalacturonase-like 

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Top 50 coexpressed genes to 8061087 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8061087 (sbi-r.1 coexpression data)

CoexMap"8057105"


sbiLOC8057105 | Entrez gene ID : 8057105      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi sot cit nta cre bna
Paralog 1 2 1 1 1 1 2 1 2 3 3 2 1 1 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00040 [list] [network] Pentose and glucuronate interconversions (74 genes)
GO BP
GO:0009901 [list] [network] anther dehiscence  (4 genes)  IEA  
GO:0010047 [list] [network] fruit dehiscence  (4 genes)  IEA  
GO:0045490 [list] [network] pectin catabolic process  (4 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (40 genes)  IEA  
Protein XP_002466242.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 2  (predict for XP_002466242.1)
Subcellular
localization
TargetP
scret 2  (predict for XP_002466242.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8061087
zma-u.5
for
103644218
zma-u.5
for
103644217
osa-u.5
for
4342698
tae-r.2
for
123143035
hvu-r.1
for
123448060
bdi-r.1
for
100829282
ath-u.5
for
PGAZAT
ath-u.5
for
QRT2
gma-u.5
for
100819195
sly-u.5
for
101264436
sly-u.5
for
PG2
bra-r.6
for
103870621
bra-r.6
for
103830105
bra-r.6
for
103830423
vvi-u.5
for
100255477
vvi-u.5
for
100243033
vvi-u.5
for
100250296
ppo-u.5
for
7468975
ppo-u.5
for
7473629
mtr-u.5
for
11444474
ghi-r.1
for
107918834
sot-r.1
for
102594305
cit-r.1
for
102609776
nta-r.1
for
107778498
nta-r.1
for
142177610


Ortholog ID: 458
Species zma zma osa bdi ath ath sly sly bra vvi vvi ppo mtr ghi sot sot cit cit nta nta nta
Symbol LOC103644218 LOC103644217 LOC4339483 LOC100829282 QRT2 AT1G80170 LOC101264436 PG2 LOC103830105 LOC100243033 LOC100265326 LOC7478117 LOC11433078 LOC107950651 LOC102594305 LOC102585179 LOC102609776 PG LOC107805711 LOC107824130 LOC107779855
Function* polygalacturonase ADPG1 polygalacturonase probable polygalacturonase At1g80170 uncharacterized LOC100829282 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein probable polygalacturonase At1g80170 polygalacturonase-2a polygalacturonase ADPG1 polygalacturonase polygalacturonase probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 polygalacturonase QRT2 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 polygalacturonase polygalacturonase polygalacturonase-like polygalacturonase-2-like probable polygalacturonase At1g80170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 4
ath04981 Folate transport and metabolism 4
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
ath00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 2
ath04517 IgSF CAM signaling 2
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 3
vvi00062 Fatty acid elongation 3
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 4
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
sot00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 3
nta04142 Lysosome 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 3
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103644218 103644217 4339483 100829282 819988 844357 101264436 544051 103830105 100243033 100265326 7478117 11433078 107950651 102594305 102585179 102609776 102578026 107805711 107824130 107779855
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