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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085774   transketolase, chloroplastic 
 zma-u.5   100279513   uncharacterized LOC100279513 
 zma-u.5   103646666   transketolase, chloroplastic-like 
 zma-u.5   103640190   transketolase, chloroplastic 
 osa-u.5   4335330   transketolase, chloroplastic 
 osa-u.5   4340025   transketolase, chloroplastic 
 ath-u.5   AT2G45290   Transketolase 
 ath-u.5   AT3G60750   Transketolase 
 gma-u.5   100805786   transketolase, chloroplastic 
 gma-u.5   100818028   transketolase, chloroplastic 
 gma-u.5   100781676   transketolase, chloroplastic 
 sly-u.5   101251315   transketolase, chloroplastic-like 
 sly-u.5   101265735   transketolase, chloroplastic-like 
 sly-u.5   101245299   transketolase, chloroplastic 
 vvi-u.5   100262551   transketolase, chloroplastic 
 vvi-u.5   100248004   transketolase, chloroplastic 
 ppo-u.5   7453964   transketolase, chloroplastic 
 ppo-u.5   18105204   transketolase, chloroplastic 
 mtr-u.5   11424367   transketolase, chloroplastic 
 mtr-u.5   11423341   transketolase, chloroplastic 

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Top 50 coexpressed genes to 8085774 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085774 (sbi-r.1 coexpression data)

CoexMap"8085774"


sbiLOC8085774 | Entrez gene ID : 8085774      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 2 3 3 2 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00030 [list] [network] Pentose phosphate pathway (57 genes)
sbi00710 [list] [network] Carbon fixation by Calvin cycle (77 genes)
sbi01200 [list] [network] Carbon metabolism (264 genes)
sbi01230 [list] [network] Biosynthesis of amino acids (224 genes)
GO BP
GO:0006098 [list] [network] pentose-phosphate shunt  (22 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (856 genes)  IEA  
GO MF
GO:0004802 [list] [network] transketolase activity  (4 genes)  IEA  
Protein XP_002446209.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002446209.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002446209.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085774

.
zma-u.5
for
100279513

.
zma-u.5
for
103646666

.
zma-u.5
for
103640190

.
osa-u.5
for
4335330

.
osa-u.5
for
4340025

.
ath-u.5
for
AT2G45290

.
ath-u.5
for
AT3G60750

.
gma-u.5
for
100805786

.
gma-u.5
for
100818028

.
gma-u.5
for
100781676

.
sly-u.5
for
101251315

.
sly-u.5
for
101265735

.
sly-u.5
for
101245299

.
vvi-u.5
for
100262551

.
vvi-u.5
for
100248004

.
ppo-u.5
for
7453964

.
ppo-u.5
for
18105204

.
mtr-u.5
for
11424367

.
mtr-u.5
for
11423341

.


Ortholog ID: 2545
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta
Symbol AT3G60750 AT2G45290 LOC100818028 LOC100781676 LOC101265735 LOC101245299 LOC4340025 LOC4335330 LOC103640190 LOC103646666 LOC103862864 LOC103841917 LOC100262551 LOC100248004 LOC7453964 LOC11423341 LOC11424367 LOC123088174 LOC123165497 LOC123429329 LOC121210881 LOC107941756 LOC111215158 LOC106450752 CHLRE_02g080200v5 LOC8072707 LOC8085774 LOC102603108 LOC102588555 LOC102622121 LOC100837200 LOC100841910 LOC107785488
Function* Transketolase Transketolase transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic-like transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic-like transketolase-1, chloroplastic transketolase-1, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic-like transketolase, chloroplastic transketolase, chloroplastic transketolase-1, chloroplastic-like transketolase-2, chloroplastic uncharacterized protein transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic-like transketolase, chloroplastic-like transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic transketolase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 10
ath01230 Biosynthesis of amino acids 7
ath00010 Glycolysis / Gluconeogenesis 6
ath00620 Pyruvate metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 6
ath01200 Carbon metabolism 4
ath00030 Pentose phosphate pathway 3
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
ath01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 16
gma01230 Biosynthesis of amino acids 11
gma00030 Pentose phosphate pathway 9
gma00710 Carbon fixation by Calvin cycle 8
gma00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 11
gma00710 Carbon fixation by Calvin cycle 9
gma00630 Glyoxylate and dicarboxylate metabolism 4
gma00030 Pentose phosphate pathway 3
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 9
sly01230 Biosynthesis of amino acids 6
sly00190 Oxidative phosphorylation 6
sly00710 Carbon fixation by Calvin cycle 5
sly00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 9
sly00710 Carbon fixation by Calvin cycle 7
sly00195 Photosynthesis 6
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa01230 Biosynthesis of amino acids 6
osa00710 Carbon fixation by Calvin cycle 5
osa00630 Glyoxylate and dicarboxylate metabolism 4
osa00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 6
osa01200 Carbon metabolism 6
osa01230 Biosynthesis of amino acids 4
osa00710 Carbon fixation by Calvin cycle 3
osa00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 4
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
zma00030 Pentose phosphate pathway 3
zma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 8
bra00030 Pentose phosphate pathway 5
bra00010 Glycolysis / Gluconeogenesis 4
bra00260 Glycine, serine and threonine metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 11
bra01230 Biosynthesis of amino acids 9
bra00710 Carbon fixation by Calvin cycle 7
bra00630 Glyoxylate and dicarboxylate metabolism 5
bra00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 3
vvi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 9
ppo00710 Carbon fixation by Calvin cycle 6
ppo01230 Biosynthesis of amino acids 6
ppo00030 Pentose phosphate pathway 4
ppo00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr01200 Carbon metabolism 3
mtr00190 Oxidative phosphorylation 2
mtr00195 Photosynthesis 2
mtr00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 9
mtr01200 Carbon metabolism 8
mtr00010 Glycolysis / Gluconeogenesis 4
mtr00030 Pentose phosphate pathway 4
mtr01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 12
tae01200 Carbon metabolism 11
tae00710 Carbon fixation by Calvin cycle 8
tae00920 Sulfur metabolism 6
tae01320 Sulfur cycle 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 11
tae01200 Carbon metabolism 7
tae00710 Carbon fixation by Calvin cycle 6
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
tae00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 7
ghi00710 Carbon fixation by Calvin cycle 7
ghi01200 Carbon metabolism 7
ghi01230 Biosynthesis of amino acids 7
ghi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 7
ghi00710 Carbon fixation by Calvin cycle 7
ghi01200 Carbon metabolism 7
ghi01230 Biosynthesis of amino acids 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 10
bna00030 Pentose phosphate pathway 6
bna00710 Carbon fixation by Calvin cycle 6
bna01230 Biosynthesis of amino acids 6
bna00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 8
bna00030 Pentose phosphate pathway 6
bna00710 Carbon fixation by Calvin cycle 6
bna01230 Biosynthesis of amino acids 6
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00710 Carbon fixation by Calvin cycle 8
cre01200 Carbon metabolism 8
cre00195 Photosynthesis 4
cre00630 Glyoxylate and dicarboxylate metabolism 3
cre00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 10
sbi00785 Lipoic acid metabolism 5
sbi00030 Pentose phosphate pathway 5
sbi00010 Glycolysis / Gluconeogenesis 4
sbi00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi04016 MAPK signaling pathway - plant 3
sbi04075 Plant hormone signal transduction 3
sbi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot01230 Biosynthesis of amino acids 7
sot00010 Glycolysis / Gluconeogenesis 4
sot00030 Pentose phosphate pathway 4
sot00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00030 Pentose phosphate pathway 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 7
bdi00710 Carbon fixation by Calvin cycle 5
bdi01230 Biosynthesis of amino acids 5
bdi00030 Pentose phosphate pathway 3
bdi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 4
nta01200 Carbon metabolism 4
nta01230 Biosynthesis of amino acids 4
nta00710 Carbon fixation by Calvin cycle 3
nta00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825246 819137 100818028 100781676 101265735 101245299 4340025 4335330 103640190 103646666 103862864 103841917 100262551 100248004 7453964 11423341 11424367 123088174 123165497 123429329 121210881 107941756 111215158 106450752 5727287 8072707 8085774 102603108 102588555 102622121 100837200 100841910 107785488
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