Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4  AT3G19540  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 
 ath-r.6  AT3G19540  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 
 ath-m.9  AT3G19540  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 
 ath-m.4.notissue  AT3G19540  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 
 ath-m.4.tis  AT3G19540  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 
 ath-m.4.str  AT3G19540  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 
 ath-m.4.hor  AT3G19540  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 
 ath-m.4.bio  AT3G19540  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 
 ath-m.4.lig  AT3G19540  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 
 ath-e.1  AT3G19540  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 
 ath-u.4  AT1G49840  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 
 gma-u.4  100813032  uncharacterized LOC100813032 
 gma-u.4  100800721  uncharacterized LOC100800721 
 gma-u.4  100792748  uncharacterized LOC100792748 
 ppo-u.4  7465058  uncharacterized LOC7465058 
 ppo-u.4  18104811  uncharacterized LOC18104811 
 ppo-u.4  7469614  uncharacterized LOC7469614 
 mtr-u.4  25489930  uncharacterized LOC25489930 
 mtr-u.4  25485360  uncharacterized LOC25485360 
 mtr-u.4  11420386  uncharacterized LOC11420386 
 sly-u.4  101265729  uncharacterized LOC101265729 
 sly-u.4  101246097  uncharacterized LOC101246097 
 osa-u.4  4343777  uncharacterized LOC4343777 
 osa-u.4  4333415  uncharacterized LOC4333415 
 osa-u.4  4352639  uncharacterized LOC4352639 

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Top 50 coexpressed genes to AT3G19540 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath514   Other types of O-glycan biosynthesis  1 13 -
 ath100   Steroid biosynthesis  1 36 -
 ath460   Cyanoamino acid metabolism  1 71 -
 ath500   Starch and sucrose metabolism  1 172 -
 ath4075   Plant hormone signal transduction  2 291 -

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ath:AT3G19540 (glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620)) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition specific* Reference

ath-u.4
for
AT3G19540


ath-r.6
for
AT3G19540


ath-m.9
for
AT3G19540


ath-m.4.notissue
for
AT3G19540


ath-m.4.tis
for
AT3G19540


ath-m.4.str
for
AT3G19540


ath-m.4.hor
for
AT3G19540


ath-m.4.bio
for
AT3G19540


ath-m.4.lig
for
AT3G19540


ath-e.1
for
AT3G19540


ath-u.4
for
AT1G49840


gma-u.4
for
100813032


gma-u.4
for
100800721


gma-u.4
for
100792748


ppo-u.4
for
7465058


ppo-u.4
for
18104811


ppo-u.4
for
7469614


mtr-u.4
for
25489930


mtr-u.4
for
25485360


mtr-u.4
for
11420386


sly-u.4
for
101265729


sly-u.4
for
101246097


osa-u.4
for
4343777


osa-u.4
for
4333415


osa-u.4
for
4352639

1 AT3G15530 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 820792 At3g15530 5.5 5.7
3.9
1.4
2.5
4.9
4.4
4.0
0.8
4.5
5.5
-0.7
0.9
-0.8
2.3
1.1
0.6
-0.1
3.2
2.2
1.1
0.9
2.0
-0.0
0.4
3.8
1.8
3.2
3.6



2 AT2G05230 DNAJ heat shock N-terminal domain-containing protein 815071 At2g05230 5.4 5.2







2.7
0.8
0.6
1.2
0.7
0.9
0.9
0.5
-0.5
0.8
0.1
0.8
0.5
1.3
1.2
1.7
-0.1
2.1
1.0
2.5
2.1
2.0
1.9
0.7
-0.0



3 AT2G05250 DNAJ heat shock N-terminal domain-containing protein 815073 At2g05250 5.3 5.1







2.0
0.8
0.6
1.2
0.7
0.9
0.9
0.5
-0.5
0.8
0.1
0.8
0.5
1.3
1.2
1.7
-0.1
2.1
1.0
2.5
2.1
2.0
1.9
0.7
-0.0



4 AT2G39870 uncharacterized protein 818574 At2g39870 5.2 4.8
4.2
35.7
2.0
3.8
3.4
0.6
4.1
1.9
3.5














5 AT3G19120 PIF / Ping-Pong family of plant transposase 821446 At3g19120 5.1 4.9
3.9
301.4
1.4
2.2
0.4
3.0
0.8
2.5
1.2
2.3
1.9
2.4
2.3
0.0
-0.2
3.0
2.4
-0.2
-0.3
1.5
0.7
0.7
0.7
2.0
0.3
-0.9



6 AT1G69910 Protein kinase superfamily protein 843327 At1g69910 5.0 5.1
3.6
88.7
1.9
3.1
0.3
3.3
2.0
3.6
1.6
0.7
0.1
-0.8
1.6
-0.0
1.5
0.5
1.3
1.8
0.3
1.1
0.7
0.3
1.0
7 AT1G27690 lipase, putative (DUF620) 839661 At1g27690 5.0 4.5
4.1
2419.3
2.1
0.3
1.4
1.5
1.5
1.7
2.2














8 GRF3 growth-regulating factor 3 818213 At2g36400 4.8 4.3
4.1
529.4
1.1
1.7
1.9
0.5
0.5
2.4
1.7
1.6
2.0
0.7
0.9
0.9
1.1
0.9
0.3
0.2
0.4
2.4
1.8
0.6
0.8
0.6
0.2
-0.1



9 WRKY21 WRKY DNA-binding protein 21 817609 At2g30590 4.8 3.9
4.4
15.9
1.3
2.7
1.2
4.6
3.3
1.6
0.6
0.3
1.8
0.0
0.4
-0.4
0.5
-0.3
3.5
3.0
2.2
0.5
0.5
0.0
0.5
0.5
-0.3
3.3
1.1
1.7
-0.0
-0.1
0.1
0.1
10 AT1G75140 uncharacterized protein 843851 At1g75140 4.8 4.7
3.5
1285.7
2.3
1.4
1.6
0.5
1.2
0.7
1.4
0.3
1.9
0.1
0.7
0.4
2.7
1.6
0.2
-0.4
1.6
0.9
1.4
-0.5
0.6
0.0
0.1
-0.2
0.3
1.1
-0.2
2.4
11 AT1G49840 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 841407 At1g49840 4.7 5.4
2.7
191.2
1.6
2.2
2.7
0.1
-1.0
2.4
4.7
8.0
1.5
4.3
1.3
4.3
1.5
2.6
2.0
2.6
1.1
2.0
1.1
1.5
0.5
1.5
0.2
0.5
0.2
3.7
3.7
1.6
0.8
0.8
0.8
1.6
0.8
12 AT5G20950 Glycosyl hydrolase family protein 832220 At5g20950 4.5 4.1
3.7
1293.8
3.7
1.6
2.8
0.2
2.0
3.2
2.1
1.0
1.1
0.6
1.0
0.7
1.7
1.3
2.2
1.1
1.5
1.1
0.3
0.3
0.3
0.1
0.8
0.7
1.1
0.5
1.7
1.4
1.3
1.2
1.0
0.4
1.4
0.1
0.3
0.1
13 AT2G41890 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein 818789 At2g41890 4.5 4.3
3.6
38.9
2.4
2.8
0.9
1.8
-1.1
4.2
3.2
1.5
0.9
2.3
0.6
2.0
1.9
1.4
0.4
2.2
-0.1
2.0
0.7
2.0
2.0
0.4
0.8
3.0



14 TIR1 F-box/RNI-like superfamily protein 825473 At3g62980 4.5 4.0
3.8
920.0
2.8
2.5
2.1
-0.2
1.1
3.6
1.1
0.7
0.5
0.4
1.5
0.5
1.4
1.3
0.4
0.0
2.1
1.0
1.1
0.1
-0.3
-1.0
2.0
4.5
2.4
0.4
0.1
1.3
15 AT5G66770 GRAS family transcription factor 836810 At5g66770 4.5 4.4
3.3
19.8
1.4
2.4
3.0
3.6
2.2
4.0
0.8
0.6
2.4
1.5
-0.3
-0.8
-0.1
-1.0
1.5
1.5
1.8
-0.0
1.6
0.6
1.8
3.1
0.6
2.7
3.1
1.1
0.8
1.1
16 AL7 alfin-like 7 838013 At1g14510 4.4 3.9
3.7
1136.8
1.4
1.4
2.2
1.5
-0.5
3.9
2.3
0.2
2.8
2.0
0.4
0.3
1.3
0.6
2.1
1.3
1.3
0.9
0.5
0.5
1.3
0.5
1.8
1.1
2.1
1.4
1.4
1.4
1.3
1.3
1.3
0.5
0.6
0.6
1.2
1.0
17 QWRF2 QWRF motif protein (DUF566) 841412 At1g49890 4.3 3.2
4.3
815.7
1.0
1.3
2.2
1.2
2.5
3.0
2.5
2.3
1.9
0.8
2.8
2.1
3.8
3.5
1.0
0.9
1.0
0.4
3.6
2.2
1.1
0.8
1.8
0.6
1.8
0.8
2.7
2.1
1.7
1.5
0.8
0.6
0.0
-0.3
0.6
-0.5
18 KIPK KCBP-interacting protein kinase 824455 At3g52890 4.3 4.6
2.9
2080.5
1.2
0.4
1.6
1.1
0.7
3.2
2.2
2.0
2.5
1.7
1.0
0.5
1.0
0.8
2.1
-0.1
0.7
1.8
0.1
0.4
0.3
0.9
0.7
3.9
1.9
2.0
1.9



19 YDA Protein kinase superfamily protein 842674 At1g63700 4.3 3.4
4.1
2.8
1.0
4.4
2.4
3.0
3.5
1.4
3.2
2.7
1.8
0.9
0.8
3.5
2.6
1.8
1.5
2.3
1.0
1.8
0.9
2.1
0.6
1.1
-0.0
2.8
1.0
2.2
0.2
1.4
0.5
0.2
-0.3
-0.1
-0.1
-0.0
-0.2
20 AT5G10020 Leucine-rich receptor-like protein kinase family protein 830865 At5g10020 4.2 4.2
3.1
76.5
1.8
3.0
3.3
1.0
0.9
2.5
1.8
2.8
1.1
-0.2
-0.9
1.8
0.1
1.8
1.2
1.5
0.6
2.0
0.2
0.2
3.8
2.4
1.0
1.4
1.4
1.0
3.3
21 BAM1 Leucine-rich receptor-like protein kinase family protein 836699 At5g65700 4.2 3.9
3.3
28.9
2.5
4.0
4.3
1.4
1.3
1.4
1.9
0.8
2.5
2.3
3.6
2.8
4.0
3.5
3.9
3.3
2.6
1.5
2.6
0.6
1.3
0.6
3.0
2.2
2.2
1.2
2.1
2.1
2.4
2.3
2.1
1.6
1.2
0.3
2.5
2.5
22 AT1G76660 hydroxyproline-rich glycoprotein family protein 843999 At1g76660 4.1 3.9
3.2
75.1
2.2
2.3
1.4
2.1
0.9
2.4
-0.0
2.3
1.6
1.6
0.8
3.8
2.2
3.9
0.6
2.3
0.7
1.5
0.6
0.5
0.3
2.0
1.6
1.7
0.9
0.5
1.0
0.9
1.4
1.0
23 AT4G32030 uncharacterized protein 829334 At4g32030 4.1 3.1
4.0
113.2
0.1
3.1
3.6
1.0
2.0
4.3
3.0
2.7
-0.5
-0.9
1.7
1.0
0.8
0.2
1.4
0.1
-0.6
1.8
0.4
-0.2





24 AT1G79060 TPRXL 844247 At1g79060 4.1 3.7
3.4
808.7
0.6
2.0
0.6
0.7
2.0
2.2
2.0
1.1
2.0
1.2
0.4
0.0
-0.5
-0.7
1.1
1.0
0.9
-0.1
-0.6
-1.1
-0.3
-0.7
2.1
1.8
1.3
1.4
1.2
1.4
1.2
0.6
0.3
1.7
0.7
25 ALE2 Protein kinase superfamily protein 816549 At2g20300 4.0 3.6
3.4
314.9
1.5
3.1
2.3
0.6
0.0
2.3
3.0
2.8
0.7
1.8
1.0
2.5
1.3
2.3
0.8
0.5
0.2
1.7
1.7
1.8
0.8
2.1
0.8
2.6
1.0
3.1
4.9
1.0
0.3
0.7
0.6
1.3
-0.2
26 AT3G11760 structural maintenance of chromosomes flexible hinge domain protein 820349 At3g11760 4.0 4.1
2.8
547.2
-0.4
1.8
1.7
0.4
3.5
3.1
3.3
0.9
0.2
1.5
0.6
1.2
-0.1
2.3
1.1
1.3
0.9
2.1
1.2
0.1
-0.2
0.8
0.5
3.3
-0.1
1.5
-0.2
1.6
0.2
1.6
0.7
0.5
-0.1
0.3
-0.8
27 TUB2 tubulin beta chain 2 836390 At5g62690 4.0 4.2







1.0
0.9
0.7
2.6
2.0
1.7
1.6
4.6
3.1
1.7
1.6
2.3
2.2
2.3
2.0
2.6
2.2
1.8
1.4
1.2
1.1
3.7
2.4
3.1
2.8
1.6
1.5
2.1
1.0
2.0
1.8
28 D6PKL2 D6 protein kinase like 2 834826 At5g47750 3.9 4.2
2.6
3019.6
1.3
0.4
1.0
1.2
0.2
0.1
2.6
1.3
2.5
1.6
2.0
0.8
2.2
2.0
2.1
0.8
3.7
2.1
2.0
1.2
1.4
-0.8
0.7
-0.0
3.4
3.0
1.6
1.1
2.8
2.1
1.1
1.0
0.8
0.7
3.2
2.6
29 RPK2 receptor-like protein kinase 2 821240 At3g02130 3.9 3.8
3.0
11.5
1.1
3.2
2.9
2.6
1.6
3.2
7.3
1.0
1.8
0.4
1.5
0.9
0.1
-0.2
2.7
2.6
0.5
0.2
2.2
1.1
-0.5
1.7
3.0
-0.3
2.2
0.6
-0.2
0.4
0.1
1.3
-0.4
30 AT5G12850 CCCH-type zinc finger protein with ARM repeat domain-containing protein 831125 At5g12850 3.9 3.2
3.5
8.7
1.6
3.5
4.1
2.2
4.7
1.1
1.3














31 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein 817905 At2g33410 3.9 3.6
3.1
302.0
1.2
3.3
0.9
0.4
0.7
3.1
1.7
0.1
0.9
0.5
1.1
1.1
0.3
-0.3
3.8
2.5
2.3
1.3
1.1
0.6
-0.2
0.3
0.8
2.0
1.3
1.7
0.6
0.1
-0.9
0.6
32 AT1G12850 Phosphoglycerate mutase family protein 837842 At1g12850 3.9 4.2
2.4
4340.7
1.7
-0.3
1.6
3.5
0.7
0.5
0.7
-1.2
2.5
0.5
1.4
1.1
1.7
0.2
0.3
0.2
1.5
1.3
1.9
1.4
-1.0
0.4
1.5
1.2
0.0
0.5
0.9
2.0
33 AT4G17950 AT hook motif DNA-binding family protein 827520 At4g17950 3.8 3.7
3.0
1016.2
1.2
1.6
2.4
1.4
0.1
2.6
3.0
1.5
2.4
0.9
1.2
0.5
2.3
0.6
2.5
2.2
1.6
0.4
0.4
-0.2
0.6
0.6
1.2
1.5
1.0
1.3
0.9
1.1
0.8
1.2
0.9
2.8
2.1
34 SHR GRAS family transcription factor 829919 At4g37650 3.8 3.4
3.2
54.9
1.8
3.8
1.7
0.2
1.8
2.2
1.0
2.7
2.4
2.3
2.2
1.4
1.1
3.0
1.1
2.0
0.2
1.8
1.0
1.7
0.1
0.9
0.3
1.6
-0.2
1.9
1.9
2.7
1.8
1.6
0.9
0.2
-0.3
1.8
1.7
35 TSD2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 844160 At1g78240 3.8 3.5
3.1
163.3
0.6
2.3
3.5
2.0
2.3
1.1
0.0
0.8
0.2
2.1
1.6
1.7
0.8
0.7
-0.3
0.6
-2.4
1.5
0.5
-0.3
-0.9
-0.2
-1.0
2.6
2.2
-1.0
2.2
-0.5
1.4
0.6
36 SPY Tetratricopeptide repeat (TPR)-like superfamily protein 820327 At3g11540 3.8 2.8
3.8
1055.3
0.9
0.6
1.5
4.8
2.0
4.7
0.4
0.8
0.7
0.1
-0.2
0.0
-0.5
-0.1
-0.9
0.4
-1.6
0.7
-1.2
0.3
0.8
1.1
0.7
0.6
0.1
0.0
-0.2
37 D6PK D6 protein kinase 835689 At5g55910 3.8 3.7
2.9
306.8
0.4
1.2
2.2
3.4
-0.4
0.4
2.6
1.3
2.5
1.6
2.0
0.8
2.2
2.0
2.1
0.8
3.7
2.1
2.0
1.2
1.4
-0.8
0.7
-0.0
3.4
3.0
1.6
1.1
2.8
2.1
1.1
1.0
0.8
0.7
3.2
2.6
38 TOR1 ARM repeat superfamily protein 828814 At4g27060 3.8 4.0
2.6
259.4
2.2
1.8
0.6
2.8
1.9
0.3
1.5
0.8
0.8
0.5
0.9
0.8
1.9
0.5
1.5
0.8
1.5
1.4
1.0
0.9
0.9
0.1
1.2
1.2
2.2
-0.1
0.4
0.7
39 AT3G61670 extra-large G-like protein, putative (DUF3133) 825340 At3g61670 3.8 3.5
3.1
375.7
1.2
1.8
1.3
0.8
-1.1
2.9
3.4
1.9
2.9
2.8
1.1
0.7
1.6
1.5
3.0
0.4
1.0
0.4
1.8
-0.3
2.2
-0.0
1.3
0.7
1.7
0.8
0.3
0.3
1.2
0.5
1.2
0.3
0.3
-0.7
2.1
-0.5
40 GAUT11 galacturonosyltransferase 11 838439 At1g18580 3.8 3.0
3.6
65.6
0.8
2.6
3.3
4.0
2.5
0.9
-0.3
2.5
1.8
0.6
0.3
2.4
1.2
-0.1
-0.8
-0.2
-0.5
0.9
-1.9
-0.8
0.8
1.0
-0.8
-1.2
-0.2
0.4
0.1
41 SMT2 sterol methyltransferase 2 838621 At1g20330 3.8 3.3
3.3
49.2
2.8
3.2
3.1
1.4
1.4
1.2
2.2
0.6
3.0
0.3
1.2
1.1
1.7
1.1
1.7
1.1
1.6
0.8
1.7
1.5
0.2
1.7
1.4
1.8
0.7
4.8
-0.2
1.9
-0.6
1.3
42 AT3G23750 Leucine-rich repeat protein kinase family protein 821957 At3g23750 3.8 4.3
2.3
121.3
1.7
2.4
2.8
1.0
2.3
1.4
4.1
1.1
0.3
1.5
1.1
0.8
0.4
1.8
1.0
2.0
0.9
4.3
1.9
-0.8
3.0
1.6
2.1
1.4
2.0
1.4



43 BRI1 Leucine-rich receptor-like protein kinase family protein 830095 At4g39400 3.7 3.4
3.0
10.4
1.7
4.3
1.4
2.5
1.5
2.2
1.6
2.0
1.1
3.5
3.4
2.9
1.9
2.7
1.4
2.2
0.7
1.4
1.4
1.5
1.2
2.8
1.6
1.9
1.4
1.1
1.2
44 AT3G05675 BTB/POZ domain-containing protein 819735 At3g05675 3.7 3.5
2.9
6431.4
1.8
-0.7
0.8
2.6
0.5
2.1
1.2
1.1
0.9
0.4
0.3
3.0
0.8
0.2
-0.3
-0.7
0.8
-0.8
0.7
0.1
0.1
-0.3
-0.2
0.8
45 AT5G53570 Ypt/Rab-GAP domain of gyp1p superfamily protein 835439 At5g53570 3.7 3.5
2.9
1040.4
1.3
1.2
1.1
1.7
-0.5
5.7
2.1
0.9
0.7
0.6
1.5
1.0
1.5
1.2
1.9
1.7
2.9
2.5
0.1
-0.5
-0.7
-1.1
-0.1
-0.6
3.8
3.2
1.4
0.8
0.5
0.1
-0.5
-0.5
1.0
-0.5
0.6
-0.7
46 AT3G63290 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 825504 At3g63290 3.7 3.3
3.1
1534.7
1.2
2.9
-0.4
0.1
-0.1
1.6
2.4
1.9
0.1
0.3
-1.0
0.3
-0.2
-0.1
0.2
-0.4
1.3
1.3
-0.7
-0.1
0.3
-0.4
-0.5
-1.0
47 AT3G54000 TIP41-like protein 824567 At3g54000 3.7 3.5
2.9
279.5
0.2
2.0
1.7
-0.3
3.8
3.0
4.7
0.2
3.7
2.7
1.2
0.9
2.1
1.3
4.6
2.3
2.4
1.1
1.1
1.0
1.9
1.7
2.8
2.3
1.4
1.0
3.1
2.8
4.9
2.1
2.4
1.0
0.6
0.2
1.1
0.4
48 OPT6 oligopeptide transporter 1 828887 At4g27730 3.7 3.6
2.7
154.2
0.6
1.9
2.6
2.6
3.6
3.4
1.0
0.1
0.7
0.3
0.7
0.4
1.0
0.2
0.2
-0.1
1.8
0.7
2.4
-0.4
-0.8
-1.3
0.5
0.4
1.3
-0.1
0.1
-0.0
-0.0
-0.1
0.4
-0.3
0.6
0.2
0.6
0.4
49 NAT12 nucleobase-ascorbate transporter 12 817328 At2g27810 3.6 2.6
3.7
222.4
2.8
3.3
2.1
0.8
-0.1
2.4
1.6
2.7
1.8
1.7
1.1
2.6
2.0
1.5
0.2
2.3
0.4
2.7
2.4
2.0
1.7
2.3
1.3
0.7
0.2
1.8
3.9
0.6
1.0
2.8
50 AT1G61350 ARM repeat superfamily protein 842429 At1g61350 3.6 2.8
3.5
433.0
0.9
1.6
2.8
1.0
1.8
1.1
0.7
1.1
1.0
1.1
0.9
2.0
1.3
0.1
-0.9
1.0
0.3
0.5
0.4
1.7
1.4
2.7
1.4
0.8
1.3
0.9
0.8
The preparation time of this page was 0.9 [sec].