Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-r.6   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.9   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.notissue   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.tis   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.str   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.hor   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.bio   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.lig   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-e.1   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 gma-u.4   100791084   succinate dehydrogenase assembly factor 1 homolog, mitochondrial-like 
 ppo-u.4   112327190   succinate dehydrogenase assembly factor 1, mitochondrial 
 mtr-u.4   11427456   succinate dehydrogenase assembly factor 1, mitochondrial 
 sly-u.4   101265269   succinate dehydrogenase assembly factor 1, mitochondrial 
 osa-u.4   4345159   succinate dehydrogenase assembly factor 1, mitochondrial 

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Top 50 coexpressed genes to AT2G39725 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath190   Oxidative phosphorylation  4 165 3.10
 ath232   Caffeine metabolism  1 3 2.12
 ath20   Citrate cycle (TCA cycle)  1 64 -
 ath230   Purine metabolism  1 87 -
 ath4120   Ubiquitin mediated proteolysis  2 155 -

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ath:AT2G39725 (LYR family of Fe/S cluster biogenesis protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT2G39725
ath-r.6
for
AT2G39725
ath-m.9
for
AT2G39725
ath-m.4.notissue
for
AT2G39725
ath-m.4.tis
for
AT2G39725
ath-m.4.str
for
AT2G39725
ath-m.4.hor
for
AT2G39725
ath-m.4.bio
for
AT2G39725
ath-m.4.lig
for
AT2G39725
ath-e.1
for
AT2G39725
gma-u.4
for
100791084
ppo-u.4
for
112327190
mtr-u.4
for
11427456
sly-u.4
for
101265269
osa-u.4
for
4345159
1 AT3G62920 zinc metalloproteinase aureolysin 825467 At3g62920 5.8 3.9
 6.1
 56.5
 1.1
 2.4
 2.6
 2.1
 0.4
 0.6
 0.6
0.2
 1.7
 2.7
 2.7
 3.0
2 AT4G35980 uncharacterized protein 829752 At4g35980 5.1 4.7
 4.1
 7192.3
 2.8
 -0.2
 0.8
 0.1
 -0.1
 2.3
0.9
 2.1
2.0
3 ATUBC2-1 Ubiquitin-conjugating enzyme family protein 841072 At1g45050 4.5 4.3
 3.6
 120.1
 1.9
 1.5
 2.1
 2.3
 1.5
 2.2
 0.6
 0.9
0.4
 2.9
 2.2
1.4
 1.5
1.2
4 AT1G53030 Cytochrome C oxidase copper chaperone (COX17) 841736 At1g53030 4.3 3.3
 4.2
 38.6
 0.9
 2.7
 1.8
 2.5
 -0.1
 0.9
 2.0
0.1
 1.6
 2.4
0.4
 5.2
3.0
 3.1
3.0
5 AT5G41560 DET1 complexing ubiquitin ligase 834158 At5g41560 4.3 4.0
 3.4
 216.8
 2.4
 2.6
 1.3
 2.7
 0.6
 1.9
 0.2
-0.0
 0.0
 3.6
2.6
6 AT4G35905 Trm112p-like protein 829745 At4g35905 4.2 3.7
 3.5
 12357.0
 0.1
 -0.4
 0.2
 -0.8
 -0.2
 1.8
 1.5
1.4
 -0.9
 2.3
 2.6
 3.2
7 AT1G51160 SNARE-like superfamily protein 841539 At1g51160 4.2 4.6
 2.6
 3213.4
 -0.0
 -0.0
 1.0
 1.5
 1.7
 2.6
 1.6
0.3
 0.3
 1.3
1.2
 2.9
 1.8
8 AT3G05570 dipeptide transport ATP-binding protein 819723 At3g05570 4.2 3.4
 3.9
 433.9
 3.0
 1.2
 3.1
 2.5
 -0.4
 0.6
 0.7
0.4
 1.1
0.2
 2.4
 3.9
 1.9
1.1
9 VPS20.1 SNF7 family protein 836508 At5g63880 4.1 4.2
 2.9
 37.3
 1.8
 3.3
 2.6
 2.4
 0.2
 3.4
 0.9
0.7
 0.5
0.4
 1.8
 1.7
 1.3
10 AT4G33780 ATP phosphoribosyltransferase regulatory subunit 829520 At4g33780 4.1 2.7
 4.4
 116.0
 2.7
 1.9
 2.6
 3.0
 -0.3
 0.7
 0.6
-0.4
 2.0
0.2
 1.7
 1.8
1.3
 1.3
11 AT2G16710 Iron-sulfur cluster biosynthesis family protein 816172 At2g16710 4.1 3.6
 3.5
 35.1
 1.5
 3.6
 3.0
 2.1
 1.7
 -0.8
 0.9
0.3
 1.0
0.2
 1.2
 3.5
2.2
 0.6
0.3
12 AT1G72690 neurofilament heavy protein 843601 At1g72690 4.1 4.6






0.5
 2.0
1.6
 1.9
0.6
 1.6
-0.1
 3.1
0.5
 2.5
13 AT5G25940 early nodulin-like protein 832663 At5g25940 3.9 4.3
 2.6
 506.4
 1.0
 0.9
 3.8
 1.9
 0.5
 0.8
 3.0
1.9
 2.0
-0.8
 1.8
1.3
 1.0
0.2
 1.8
0.3
14 AT4G25225 uncharacterized protein 5008162 At4g25225 3.9 4.2






2.2
 1.6
 2.0
1.1
 4.6
2.7
 2.4
1.7
 2.0
2.0
15 AT5G02580 argininosuccinate lyase 831095 At5g02580 3.9 3.5
 3.3
 1065.3
 4.0
 0.9
 1.4
 2.2
 1.4
 0.7
 0.8
-0.1
 0.0
-0.4
 0.3
 1.5
1.4
 -0.1
-0.8
16 AT3G51390 DHHC-type zinc finger family protein 824302 At3g51390 3.9 2.7
 4.0
 419.5
 1.3
 2.5
 0.6
 1.1
 -0.6
 1.0
 0.0
 -0.4
-0.4
 1.0
 0.8
-0.1
 0.7
17 PNC1 peroxisomal adenine nucleotide carrier 1 819693 At3g05290 3.9 4.0
 2.7
 22.6
 2.3
 4.1
 1.2
 2.3
 -0.2
 2.6
 1.4
0.1
 1.6
0.7
 0.3
0.3
 0.5
-0.3
 0.4
18 AT2G26230 uricase / urate oxidase / nodulin 35 817163 At2g26230 3.8 3.9
 2.8
 44.2
 2.2
 2.2
 2.3
 3.6
 1.8
 1.3
 0.3
-0.8
 -0.6
 0.5
 2.7
 -0.1
19 AT5G62950 RNA polymerase II, Rpb4, core protein 836415 At5g62950 3.8 3.4
 3.2
 913.9
 1.5
 1.5
 1.6
 1.3
 -0.1
 2.0
 -0.4
 0.4
 1.2
1.0
 2.6
 1.6
20 AT4G23885 uncharacterized protein 828488 At4g23885 3.8 4.2
 2.4
 457.4
 3.0
 1.3
 1.0
 2.2
 0.6
 1.2
 2.8
0.9
 1.7
 2.3
 2.6
 1.6
21 JAZ11 jasmonate-zim-domain protein 11 823426 At3g43440 3.8 4.5






2.0
 0.2
-0.2
 0.8
-0.4
 1.3
0.7
0.3
22 AT5G16450 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase 831506 At5g16450 3.8 3.5
 3.0
 176.5
 1.1
 1.4
 2.7
 4.4
 0.3
 1.3
 1.6
0.6
 2.2
0.5
 3.1
0.7
 0.7
0.2
 1.9
23 GRX4 glutaredoxin 4 820809 At3g15660 3.8 3.5
 3.0
 1046.7
 0.7
 1.1
 1.1
 1.8
 -0.3
 2.1
 1.7
1.5
 1.9
 2.8
 2.6
 2.2
2.0
24 ETFBETA electron transfer flavoprotein beta 834363 At5g43430 3.8 3.2
 3.3
 90.2
 1.1
 3.9
 2.3
 2.8
 0.4
 2.2
 0.1
-0.5
 1.5
 0.7
 -0.4
 1.8
25 CSY2 citrate synthase 2 825044 At3g58750 3.7 3.9
 2.6
 18.7
 5.1
 3.0
 2.8
 5.1
 1.0
 1.8
 0.2
-0.0
 0.6
-0.2
 0.8
0.1
 1.3
-0.8
 0.5
26 AT5G00560 28720266 AT5G00560 3.7 3.8






0.1




27 GPX8 glutathione peroxidase 8 842652 At1g63460 3.7 3.3
 3.1
 1337.0
 -0.1
 1.8
 1.6
 1.2
 0.5
 1.9
 0.6
0.5
 1.2
0.8
 1.4
0.7
 2.0
1.7
 2.0
1.4
28 AT1G09794 Cox19 family protein (CHCH motif) 10723123 At1g09794 3.7 3.9






2.6
 0.8
 1.2
 0.8
 1.3
 2.7
29 BLOS2 biogenesis of lysosome organelles complex 1 subunit-like protein 835016 At5g49550 3.6 3.3
 3.0
 367.3
 1.0
 1.8
 1.4
 3.2
 -0.4
 -0.2
 1.9
0.3
 -0.1
 1.8
 3.4
 2.4
30 COX17 cytochrome c oxidase 17 820770 At3g15352 3.6 2.9
 3.4
 137.5
 1.1
 1.5
 4.2
 2.8
 0.2
 1.5
 2.0
0.1
 1.6
 2.4
0.4
 5.2
3.0
 3.1
3.0
31 AT5G55290 ATPase, V0 complex, subunit E 835622 At5g55290 3.6 4.0
 2.2
 2880.0
 0.7
 0.5
 0.2
 1.4
 1.5
 3.6
 1.6
1.6
 0.7
0.0
 2.2
1.6
 3.4
3.3
 2.8
32 AT1G17490 epidermal patterning factor-like protein 838322 At1g17490 3.6 3.1
 3.1
 331.6
 4.2
 1.8
 3.7
 1.1
 -0.5
 0.8
 2.0
1.6
 1.9
0.6
 1.6
-0.1
 3.1
0.5
 2.5
33 MED9 mediator of RNA polymerase II transcription subunit-like protein 841951 At1g55080 3.6 3.2
 3.1
 101.4
 2.2
 1.8
 2.3
 3.0
 2.3
 0.9
 0.4
-0.7
 0.4
-0.1
 1.1
 0.1
 0.9
34 SEN1 splicing endonuclease 1 823701 At3g45590 3.6 2.3
 4.0
 665.4
 1.3
 1.6
 1.4
 1.8
 -0.1
 -0.8
 1.0
-0.4
 0.2
 -1.3
 1.8
 0.6
0.5
35 UBC13 ubiquitin-conjugating enzyme 13 823796 At3g46460 3.6 3.2
 3.0
 1657.7
 1.7
 1.0
 1.0
 0.9
 -0.0
 1.8
 0.6
0.4
 0.8
-0.6
 1.7
0.1
 2.5
1.8
 0.5
0.4
36 AT3G09735 S1FA-like DNA-binding protein 820131 At3g09735 3.6 3.5
 2.7
 1256.5
 -0.5
 1.0
 1.3
 1.1
 0.1
 1.9
 2.0
1.9
 2.0
0.4
 2.9
1.3
 2.0
1.7
 1.7
1.0
37 ELF4-L3 ELF4-like 3 815182 At2g06255 3.5 2.8
 3.3
 114.5
 3.4
 0.7
 1.1
 2.4
 -0.6
 1.4
 0.7
0.5
 0.7
0.1
 0.8
-0.5
 1.9
0.9
 0.7
0.4
38 AT5G61450 P-loop containing nucleoside triphosphate hydrolases superfamily protein 836266 At5g61450 3.5 3.8
 2.3
 155.9
 3.2
 2.5
 0.8
 2.1
 0.3
 0.6
 1.8
0.1
 0.4
-0.6
 0.7
 0.8
 0.3
0.2
39 AT1G27300 uncharacterized protein 839619 At1g27300 3.5 2.7
 3.4
 48.5
 1.6
 1.8
 3.1
 3.3
 1.4
 1.2
 1.4
1.0
 0.7
 0.5
 0.3
 -0.1
40 AT5G47890 NADH-ubiquinone oxidoreductase B8 subunit 834840 At5g47890 3.5 2.6
 3.5
 4540.0
 -0.2
 0.1
 1.1
 0.8
 1.3
 2.2
 2.5
-0.6
 2.0
0.8
 3.5
2.4
 2.6
 1.4
41 AT1G77540 Acyl-CoA N-acyltransferases (NAT) superfamily protein 844090 At1g77540 3.5 2.6
 3.5
 415.6
 1.5
 1.2
 1.9
 2.6
 1.7
 0.8
 0.7
 1.1
 1.2
 1.2
 0.3
42 AT4G20330 Transcription initiation factor TFIIE, beta subunit 827781 At4g20330 3.5 2.9
 3.1
 14.7
 2.4
 3.6
 3.3
 3.0
 -0.0
 1.4
 1.4
1.3
 0.9
 0.8
-0.1
 1.6
 0.3
43 DPMS2 dolichol phosphate-mannose biosynthesis regulatory protein-like protein 843775 At1g74340 3.5 3.4
 2.7
 1596.0
 0.5
 -0.1
 1.7
 1.3
 -0.2
 1.5
 2.4
1.5
 0.7
 1.8
0.8
 3.1
3.0
 0.6
44 AT2G34200 RING/FYVE/PHD zinc finger superfamily protein 817981 At2g34200 3.5 2.4
 3.6
 472.4
 1.5
 2.3
 2.0
 1.1
 -0.2
 2.2
 1.1
0.6
 -0.4
-0.5
 0.3
-0.5
 2.2
0.5
 0.6
45 AT2G42670 2-aminoethanethiol dioxygenase, putative (DUF1637) 818867 At2g42670 3.5 2.9
 3.1
 789.5
 1.0
 1.7
 1.2
 1.1
 -0.1
 2.4
 0.7
-0.1
 0.5
-0.3
 1.2
0.5
 1.8
0.1
 0.8
46 AT5G57060 60S ribosomal L18a-like protein 835810 At5g57060 3.5 2.7
 3.3
 291.6
 0.6
 2.6
 2.7
 1.5
 -0.9
 2.1
 0.4
-0.1
 0.5
-0.2
 0.1
 0.2
47 AT3G55600 Membrane fusion protein Use1 824725 At3g55600 3.5 3.0
 3.0
 309.5
 1.1
 2.9
 2.5
 1.2
 -0.0
 2.1
 0.2
0.0
 0.9
 1.6
1.6
 0.6
 2.4
1.5
48 PNC2 peroxisomal adenine nucleotide carrier 2 832812 At5g27520 3.5 3.2
 2.8
 606.3
 3.3
 2.2
 2.3
 1.2
 -0.1
 1.6
 1.4
0.1
 1.6
0.7
 0.3
0.3
 0.5
-0.3
 0.4
49 AT1G16810 7-dehydrocholesterol reductase-like protein 838252 At1g16810 3.4 3.0
 3.0
 317.4
 0.1
 2.3
 0.8
 1.8
 -0.5
 1.5
 0.9
0.6
 0.4
-1.2
 0.7
0.6
 2.6
0.8
 0.4
50 WIT1 WPP domain-interacting protein 1 831010 At5g11390 3.4 3.1
 2.9
 203.5
 1.6
 3.2
 2.2
 2.4
 0.1
 0.8
 0.6
-0.2
 -0.1
-0.2
 -0.6
-0.7
 1.6
-1.2
 1.0
-0.1
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