Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.6   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.notissue   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.1   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.4   100807932   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 ppo-u.4   7479044   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 mtr-u.4   25484125   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 sly-u.4   101264147   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 osa-u.4   4333379   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 

close


Top 50 coexpressed genes to MEE40 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath970   Aminoacyl-tRNA biosynthesis  1 199 -

close


ath:MEE40 (Pentatricopeptide repeat (PPR) superfamily protein) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
MEE40
ath-r.6
for
MEE40
ath-m.9
for
MEE40
ath-m.4.notissue
for
MEE40
ath-m.4.tis
for
MEE40
ath-m.4.str
for
MEE40
ath-m.4.hor
for
MEE40
ath-m.4.bio
for
MEE40
ath-m.4.lig
for
MEE40
ath-e.1
for
MEE40
gma-u.4
for
100807932
ppo-u.4
for
7479044
mtr-u.4
for
25484125
sly-u.4
for
101264147
osa-u.4
for
4333379
1 SVR7 pentatricopeptide (PPR) repeat-containing protein 827333 At4g16390 11.4 9.7
 10.0
 3.0
 4.4
 3.7
 4.7
 4.0
 2.6
 6.1
 5.2
5.1
 4.0
2.9
 6.2
4.2
 5.8
3.3
 2.1
2 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 837522 At1g09900 11.1 11.4
 7.9
 4.2
 4.0
 3.2
 3.1
 4.2
 1.7
 5.7
 5.6
3.8
 2.9


3 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 834701 At5g46580 8.9 7.6
 7.8
 23.4
 4.0
 2.6
 4.9
 2.2
 2.4
 6.1
 6.1
5.9
 2.0
 5.8
 4.1
 2.2
4 MURE ALBINO OR PALE-GREEN 13 842672 At1g63680 8.9 8.5
 6.9
 26.1
 2.9
 2.2
 2.9
 4.8
 2.9
 3.6
 6.7
5.4
 3.3
 5.1
 2.2
 1.9
5 PTAC2 plastid transcriptionally active 2 843824 At1g74850 8.4 9.2
 5.3
 15.6
 5.5
 3.0
 3.2
 5.6
 2.7
 5.4
 8.1
5.5
 4.6
 6.6
 5.5
 2.8
6 AT2G18940 Tetratricopeptide repeat (TPR)-like superfamily protein 816411 At2g18940 8.3 7.5
 6.9
 5.3
 2.8
 2.7
 4.8
 4.9
 2.1
 4.7
 4.8
4.1
 2.3
 3.7
 6.3
 2.3
7 PGR3 proton gradient regulation 3 829314 At4g31850 7.9 7.7
 5.9
 65.3
 3.0
 4.6
 3.8
 2.3
 2.8
 5.7
 1.1
4.1
 5.5
 1.5
8 CRR21 Tetratricopeptide repeat (TPR)-like superfamily protein 835668 At5g55740 7.8 6.6
 6.8
 29.7
 3.5
 3.2
 3.1
 3.6
 3.3
 4.9
 4.8
 5.0
 2.5
 5.1
 1.6
9 EMB25 DEAD/DEAH box helicase 843343 At1g70070 7.6 7.0
 6.2
 2.8
 4.9
 5.7
 3.0
 4.2
 1.4
 4.8
 4.5
 4.1
 2.6
 2.8
 2.3
10 AT5G07900 Mitochondrial transcription termination factor family protein 830684 At5g07900 7.6 7.5
 5.6
 5.5
 2.7
 2.8
 3.5
 4.7
 0.9
 3.1
 3.1
2.8
 3.0
2.7
 2.8
2.6
 2.5
 0.9
0.2
11 AT3G02060 DEAD/DEAH box helicase 821294 At3g02060 7.5 7.8
 5.1
 1.4
 3.5
 4.3
 3.8
 5.0
 1.9
 4.7
 3.3
2.4
 1.7
0.9
 3.3
 4.4
 1.0
12 AT4G30825 Tetratricopeptide repeat (TPR)-like superfamily protein 829206 At4g30825 7.3 7.0
 5.6
 44.3
 3.4
 2.3
 2.9
 4.1
 2.1
 5.5
 4.6
 2.8
 4.4
 4.4
 3.0
13 BPG2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 824885 At3g57180 7.2 6.4
 6.1
 90.2
 4.0
 2.6
 3.3
 1.9
 2.9
 2.8
 5.9
 4.3
 5.7
 3.0
 3.5
14 TRZ4 tRNAse Z4 820872 At3g16260 7.2 6.6
 5.8
 5.5
 4.4
 3.5
 3.1
 4.0
 1.7
 4.2
 3.5
2.7
 1.6
 4.3
 1.8
-0.3
 1.2
15 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 825073 At3g59040 7.0 7.1
 5.1
 105.1
 3.8
 1.9
 2.1
 3.5
 2.2
 4.6
 2.0
1.4
 3.6
 2.5
 5.6
 2.9
16 AT3G46610 Pentatricopeptide repeat (PPR-like) superfamily protein 823814 At3g46610 6.9 7.3






3.3
 4.8
4.5
 3.0
 3.2
 3.6
 0.4
17 ECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 838121 At1g15510 6.8 6.8
 5.0
 21.0
 2.8
 2.6
 2.6
 3.7
 2.5
 5.5
 3.3
 2.9
 2.4
 3.3
 2.4
18 AT3G14330 Tetratricopeptide repeat (TPR)-like superfamily protein 820653 At3g14330 6.8 7.0
 4.8
 393.3
 2.7
 3.3
 4.6
 3.6
 2.2
 3.6
 2.8

2.1
19 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 843356 At1g70200 6.8 7.5
 4.3
 149.3
 3.7
 1.8
 1.9
 2.2
 2.2
 3.8
 5.5
4.7
 2.7
 2.4
 4.8
 0.6
20 AT3G06980 DEA(D/H)-box RNA helicase family protein 819883 At3g06980 6.8 6.4
 5.4
 86.0
 2.8
 2.7
 3.6
 2.0
 1.9
 3.6
 4.3
3.6
 2.5
 6.2
 4.3
 2.0
21 AT3G29230 Tetratricopeptide repeat (TPR)-like superfamily protein 822578 At3g29230 6.8 6.7
 5.0
 55.9
 3.5
 2.3
 3.3
 2.8
 1.8
 3.2
 6.2
5.7
 2.1
 3.0
 5.7
 2.1
22 AT2G41950 DNA-directed RNA polymerase subunit beta 818795 At2g41950 6.7 5.7
 6.0
 13.2
 3.1
 3.2
 2.9
 2.7
 2.1
 3.1
 3.9
3.0
 3.4
 4.9
 3.2
 0.8
23 AT5G48730 Pentatricopeptide repeat (PPR) superfamily protein 834931 At5g48730 6.6 6.7
 4.7
 53.5
 3.2
 2.1
 3.0
 4.2
 1.8
 2.2
 1.6
 2.4
 3.3
 2.0
 2.7
24 LPA66 Pentatricopeptide repeat (PPR) superfamily protein 834949 At5g48910 6.6 7.3
 4.1
 81.2
 2.2
 2.2
 3.8
 3.6
 2.3
 5.2
 3.3
 3.1

1.8
25 PTAC3 plastid transcriptionally active 3 819581 At3g04260 6.5 6.6
 4.6
 108.6
 4.4
 3.3
 3.3
 1.9
 2.4
 4.1
 6.9
2.5
 2.4
 5.9
 4.6
 2.0
26 OTP51 endonuclease 816078 At2g15820 6.4 6.5
 4.6
 15.1
 4.3
 2.1
 2.9
 3.8
 1.8
 2.6
 3.7
3.2
 5.3
 3.8
 2.2
 3.3
27 AT1G05140 Peptidase M50 family protein 839307 At1g05140 6.4 5.6
 5.5
 230.5
 2.0
 1.6
 3.1
 4.6
 2.5
 2.0
 3.6
2.8
 2.1
1.7
 3.6
 5.0
 1.2
28 EMB1006 Pentatricopeptide repeat (PPR) superfamily protein 835093 At5g50280 6.3 6.8
 4.2
 234.5
 3.4
 2.5
 1.9
 3.9
 1.6
 3.7
 5.7
4.1
 4.3
 2.2
 3.8
 1.4
29 CAF1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 816521 At2g20020 6.3 5.4
 5.4
 88.4
 4.0
 1.7
 4.0
 2.5
 2.0
 3.6
 6.4
3.1
 3.2
2.7
 4.0
 1.6
 2.1
30 AT3G04550 rubisco accumulation factor-like protein 819611 At3g04550 6.2 5.5
 5.3
 136.7
 2.9
 1.6
 4.3
 3.0
 1.7
 4.1
 4.6
 2.7
 4.6
 4.3
 1.7
31 AT2G19870 tRNA/rRNA methyltransferase (SpoU) family protein 816506 At2g19870 6.1 6.3






4.4
 4.6
 3.4
 4.4
 2.6
 1.5
32 emb1417 Pentatricopeptide repeat (PPR) superfamily protein 827867 At4g21190 6.1 6.3
 4.2
 108.5
 3.3
 2.2
 2.3
 2.9
 1.9
 2.6
 3.0
1.9
 2.0
 2.5
 2.6
 2.3
33 EMB2768 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial 821282 At3g02660 6.1 5.2
 5.3
 27.5
 2.6
 2.6
 2.4
 3.0
 2.3
 4.2
 6.3
5.3
 4.3
 3.9
3.6
 4.7
 1.9
34 emb1138 DEAD box RNA helicase (RH3) 832713 At5g26742 5.9 6.5






4.6
 6.2
5.9
 3.2
2.5
 4.4
 6.4
 2.6
35 CFM3A CRM family member 3A 821881 At3g23070 5.9 5.6
 4.6
 79.2
 3.4
 4.2
 2.2
 2.2
 2.3
 4.7
 4.9
 4.6
 4.0
 3.0
 2.0
36 HCF152 Tetratricopeptide repeat (TPR)-like superfamily protein 820122 At3g09650 5.9 5.8
 4.4
 39.4
 2.3
 1.8
 3.7
 3.5
 1.7
 3.9
 7.0
 3.8
 4.8
 3.7
 0.6
0.3
37 Mfl1 Mitochondrial substrate carrier family protein 834218 At5g42130 5.8 5.5
 4.5
 12.0
 3.3
 1.8
 5.4
 4.2
 2.3
 1.0
 4.1
 2.8
 2.4
 3.9
 0.3
38 AT1G73710 Pentatricopeptide repeat (PPR) superfamily protein 843706 At1g73710 5.8 6.1
 3.9
 1167.5
 2.2
 1.1
 2.1
 2.3
 1.7
 4.3
 2.7
 4.3
 1.6
 1.3
 0.3
39 EMB2654 Tetratricopeptide repeat (TPR)-like superfamily protein 818771 At2g41720 5.7 5.7
 4.2
 238.2
 2.9
 1.6
 2.7
 3.1
 2.3
 4.1
 3.3
 1.8
 2.4
 4.3
 2.8
40 OCP3 overexpressor of cationic peroxidase 3 830997 At5g11270 5.7 5.2
 4.7
 409.9
 2.9
 1.3
 2.9
 2.3
 0.9
 4.3
 4.9
1.9
 1.3
 2.7
 3.2
 0.7
41 AT3G02450 cell division protein ftsH 821139 At3g02450 5.7 5.0
 4.8
 80.0
 3.5
 3.2
 3.6
 2.1
 3.4
 3.8
 5.6
3.8
 3.3
 3.9
 3.6
 2.4
42 AT3G04760 Pentatricopeptide repeat (PPR-like) superfamily protein 819636 At3g04760 5.7 5.6
 4.3
 25.8
 2.7
 2.8
 3.3
 5.0
 2.6
 4.5
 5.2
3.7
 3.1
0.8
 3.5
 3.2
43 AT5G15010 Tetratricopeptide repeat (TPR)-like superfamily protein 831353 At5g15010 5.7 4.9
 4.9
 41.0
 1.2
 2.7
 1.7
 2.6
 0.5
 1.6
 1.9
 2.3
1.9
 0.6
 0.7
 0.3
44 EMB2279 pentatricopeptide (PPR) repeat-containing protein 839941 At1g30610 5.7 5.9
 3.9
 56.0
 3.2
 2.7
 1.9
 4.5
 2.0
 4.5
 4.7
 4.0
 3.1
 3.4
 3.3
45 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 839299 At1g01970 5.7 5.1
 4.7
 125.0
 2.4
 2.5
 4.7
 3.4
 2.5
 2.9
 2.1
1.3
 3.0
 2.1
 5.5
 1.8
46 EMB175 Pentatricopeptide repeat (PPR) superfamily protein 831717 At5g03800 5.6 5.9






3.8
 6.3
 3.6
 3.3
 4.7
 2.8
47 AT1G79080 Pentatricopeptide repeat (PPR) superfamily protein 844249 At1g79080 5.5 4.6
 4.9
 83.8
 3.0
 0.9
 4.1
 2.2
 0.6
 4.5
 4.0
3.8
 2.1
1.6
 5.3
 4.6
48 CFM3B CRM family member 3B 827098 At4g14510 5.5 5.7
 3.8
 21.4
 2.8
 3.2
 2.0
 4.9
 1.5
 3.7
 4.9
 4.6
 4.0
 3.0
 2.0
49 PTAC15 plastid transcriptionally active 15 835506 At5g54180 5.5 3.9
 5.6
 316.3
 2.7
 3.7
 2.8
 0.8
 2.3
 3.3
 3.6
 2.2
 2.4
 4.6
50 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 830157 At4g39960 5.5 4.3
 5.2
 22.6
 3.2
 1.9
 3.1
 3.2
 2.6
 2.9
 4.5
4.3
 4.4
3.7
 4.9
 1.9
 1.5
1.1
The preparation time of this page was 1.7 [sec].