cis; CTTATCC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
 TTATCC SREATMSD [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CTTATCC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CTTATCC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.70At1g68190zinc finger (B-box type) family protein C2C2-CO-like
0.68At1g68520zinc finger (B-box type) family protein C2C2-CO-like
0.68At2g18300basic helix-loop-helix (bHLH) family protein BHLH
0.68At4g14540CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family CCAAT-HAP3
0.65At4g36540basic helix-loop-helix (bHLH) family protein BHLH
0.62At5g63470CCAAT-box binding transcription factor Hap5a, putative CCAAT-HAP5
0.57At2g20180basic helix-loop-helix (bHLH) family protein ((PIL5)) BHLH
0.55At1g34310transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ARF
0.55At4g01460basic helix-loop-helix (bHLH) family protein BHLH
0.55At2g02450no apical meristem (NAM) family protein NAC
0.54At5g08330TCP family transcription factor, putative TCP
0.53At1g33240trihelix DNA-binding protein, putative Trihelix
0.51At5g60970TCP family transcription factor, putative TCP
0.51At2g26580plant-specific transcription factor YABBY family protein C2C2-YABBY
-0.51At2g29060scarecrow transcription factor family protein GRAS

link to other 304 cis elements in ATTED

similar seq.
←CTTATCC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GGATAAG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CTTATCC1.000.1153
TTATCCA0.970.1054
TCTTATC0.960.0923
CTTATCT0.940.0821
TATCCAC0.940.0753
ATCTTAT0.940.0723
GATAAGG0.940.0739
CCTTATC0.940.1017
AGATAAG0.930.0838
GGATAAG0.920.0689