cis; TCTTATC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
TGGCGGCTCTTATCTCACGTGATG GREGIONNTPRB1B [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TCTTATC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TCTTATC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.65At1g68520zinc finger (B-box type) family protein C2C2-CO-like
0.65At4g14540CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family CCAAT-HAP3
0.61At2g18300basic helix-loop-helix (bHLH) family protein BHLH
0.60At4g36540basic helix-loop-helix (bHLH) family protein BHLH
0.58At1g68190zinc finger (B-box type) family protein C2C2-CO-like
0.57At1g34310transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ARF
0.54At2g02450no apical meristem (NAM) family protein NAC
0.52At5g20220zinc knuckle (CCHC-type) family protein C2H2
0.51At2g41940zinc finger (C2H2 type) family protein ((ZFP8)) C2H2
0.50At5g56860zinc finger (GATA type) family protein C2C2-Gata
0.49At3g02830zinc finger (CCCH-type) family protein ((ZFN1)) C2H2
0.49At2g20180basic helix-loop-helix (bHLH) family protein ((PIL5)) BHLH
0.48At3g59060basic helix-loop-helix (bHLH) family protein ((PIL6)) BHLH
0.48At5g60970TCP family transcription factor, putative TCP
0.47At3g11110zinc finger (C3HC4-type RING finger) family protein C3H

link to other 304 cis elements in ATTED

similar seq.
TCTTATC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GATAAGA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TCTTATC1.000.0923
CTTATCC0.960.1153
ATCTTAT0.960.0723
CTTATCT0.950.0821
TTATCCA0.950.1054
GATAAGG0.950.0739
AGATAAG0.940.0838
AAGATAA0.940.0641
TATCCAC0.930.0753
CCTTATC0.920.1017