cis; CTTATCT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
TGGCGGCTCTTATCTCACGTGATG GREGIONNTPRB1B [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CTTATCT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CTTATCT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.67At1g68520zinc finger (B-box type) family protein C2C2-CO-like
0.64At4g14540CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family CCAAT-HAP3
0.61At2g18300basic helix-loop-helix (bHLH) family protein BHLH
0.59At4g36540basic helix-loop-helix (bHLH) family protein BHLH
0.58At2g02450no apical meristem (NAM) family protein NAC
0.56At1g68190zinc finger (B-box type) family protein C2C2-CO-like
0.54At1g34310transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ARF
0.53At5g20220zinc knuckle (CCHC-type) family protein C2H2
0.49At2g26580plant-specific transcription factor YABBY family protein C2C2-YABBY
-0.49At3g11200PHD finger family protein Alfin-like
0.49At2g41940zinc finger (C2H2 type) family protein ((ZFP8)) C2H2
0.47At5g56860zinc finger (GATA type) family protein C2C2-Gata
0.47At2g20570golden2-like transcription factor (GLK1) ((GLK1, GPRI1)) G2-like
0.47At3g02830zinc finger (CCCH-type) family protein ((ZFN1)) C2H2
0.47At3g59060basic helix-loop-helix (bHLH) family protein ((PIL6)) BHLH

link to other 304 cis elements in ATTED

similar seq.
CTTATCT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AGATAAG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CTTATCT1.000.0821
GATAAGG0.950.0739
TCTTATC0.950.0923
AGATAAG0.950.0838
CTTATCC0.940.1153
CCTTATC0.940.1017
TATCCAC0.940.0753
TTATCCA0.940.1054
ATCTTAT0.940.0723
GATAAGA0.930.0742