cis; GTTCGGG


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GTTCGGG

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GTTCGGG.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.58At1g17460myb family transcription factor MYB-related
0.55At3g21175zinc finger (GATA type) family protein ((ZML1)) C2C2-Gata
-0.53At1g69570Dof-type zinc finger domain-containing protein C2C2-Dof
0.53At1g65040zinc finger (C3HC4-type RING finger) family protein C3H
-0.52At3g52800zinc finger (AN1-like) family protein C2H2
-0.52At1g09250expressed protein BHLH
-0.52At3g20310ethylene-responsive element-binding family protein ((ATERF7)) AP2-EREBP
-0.51At3g60080zinc finger (C3HC4-type RING finger) family protein C3H
-0.50At1g22190AP2 domain-containing transcription factor, putative AP2-EREBP
0.49At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
-0.49At4g36730G-box binding factor 1 (GBF1) ((GBF1)) bZIP
-0.47At4g37790homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 ((HAT22)) Homeobox
-0.47At1g50600scarecrow-like transcription factor 5 (SCL5) GRAS
-0.47At1g21910AP2 domain-containing transcription factor family protein AP2-EREBP
0.47At5g66320zinc finger (GATA type) family protein C2C2-Gata

link to other 304 cis elements in ATTED

similar seq.
GTTCGGG
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CCCGAAC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GTTCGGG1.000.07139
GCGAAGG0.730.0979
TTCTGGA0.690.0782
GGCCTTT0.660.06146
CCAAGCG0.650.0670
CTAGAAG0.630.0641
TCTCGAA0.620.0640
TCTGGAA0.620.0720