cis; TAGCCAC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
  GCCAC SORLIP1AT [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TAGCCAC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TAGCCAC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
-0.49At5g15150homeobox-leucine zipper protein 7 (HAT7) / HD-ZIP protein 7 / HD-ZIP protein (HB-3) ((ATHB-3, HAT7)) Homeobox
0.48At5g20220zinc knuckle (CCHC-type) family protein C2H2
0.44At4g14540CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family CCAAT-HAP3
0.44At5g47610zinc finger (C3HC4-type RING finger) family protein C3H
0.40At2g21320zinc finger (B-box type) family protein C2C2-CO-like

link to other 304 cis elements in ATTED

similar seq.
←TAGCCAC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GTGGCTA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TAGCCAC1.000.0759
AGATAAG0.900.0838
GATAAGG0.900.0739
TCTTATC0.900.0923
CTTATCT0.890.0821
ATCTTAT0.890.0723
CTTATCC0.880.1153
GATAAGA0.870.0742
TATCCAC0.870.0753
CCTTATC0.870.1017