cis; TCTTTCC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TCTTTCC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TCTTTCC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.62At3g52800zinc finger (AN1-like) family protein C2H2
0.60At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.58At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.55At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.55At3g50060myb family transcription factor MYB
0.55At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.55At3g20310ethylene-responsive element-binding family protein ((ATERF7)) AP2-EREBP
-0.55At1g17460myb family transcription factor MYB-related
0.54At1g01060myb family transcription factor ((LHY)) MYB-related
0.53At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.53At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.52At1g51700Dof-type zinc finger domain-containing protein (ADOF1) ((ADOF1)) C2C2-Dof
0.52At1g21910AP2 domain-containing transcription factor family protein AP2-EREBP
0.52At4g37790homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 ((HAT22)) Homeobox
0.52At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2

link to other 304 cis elements in ATTED

similar seq.
TCTTTCC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GGAAAGA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TCTTTCC1.000.0638
CTTTCCT0.880.0647
ACCGCGT0.840.1098
CCTCTCT0.830.0657
ACGCGCT0.810.09111
ACGCGTT0.810.1096
CGCGTTT0.800.1193
ACGCGGT0.800.09141
AACGCGT0.800.10127
GCGTATG0.800.0653