ATTED-II : GeneID search result

[←][→] ath AT1G64580 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(4405 genes)

ISM

GO MF

KEGG

Protein

NP_176639.2

BLAST

NP_176639.2

Orthologous

[Ortholog page] AT3G16710 (ath) AT3G22470 (ath) AT4G26800 (ath) AT5G16640 (ath) AT5G41170 (ath) AT1G06580 (ath) AT1G12300 (ath) AT1G12620 (ath) RPF1 (ath) AT1G62590 (ath) RPF2 (ath) AT1G62680 (ath) NG1 (ath) AT1G62910 (ath) RPF3 (ath) AT1G63070 (ath) AT1G63080 (ath) AT1G63130 (ath) AT1G63150 (ath) AT1G63330 (ath) AT1G63400 (ath) AT1G12775 (ath) LOC7455414 (ppo) LOC7465949 (ppo) LOC7497413 (ppo) AT1G62914 (ath) AT1G64583 (ath) LOC11409172 (mtr) LOC11411617 (mtr) LOC11411874 (mtr) LOC11413784 (mtr) LOC11414076 (mtr) LOC11416151 (mtr) LOC11417300 (mtr) LOC11419137 (mtr) LOC11419300 (mtr) LOC11419320 (mtr) LOC11420208 (mtr) LOC11422222 (mtr) LOC11430397 (mtr) LOC11436467 (mtr) LOC11439118 (mtr) LOC25479607 (mtr) LOC25479611 (mtr) LOC25479678 (mtr) LOC25480002 (mtr) LOC25480323 (mtr) LOC25480558 (mtr) LOC25480855 (mtr) LOC25481060 (mtr) LOC25481299 (mtr) LOC25481803 (mtr) LOC25482431 (mtr) LOC25483258 (mtr) LOC25496585 (mtr) LOC25496655 (mtr) LOC25496724 (mtr) LOC25496733 (mtr) LOC25496736 (mtr) LOC25496740 (mtr) LOC25496751 (mtr) LOC25496764 (mtr) LOC25496765 (mtr) LOC25497066 (mtr) LOC25497290 (mtr) LOC25497361 (mtr) LOC100243276 (vvi) LOC100244236 (vvi) LOC100246659 (vvi) LOC100252034 (vvi) LOC100253509 (vvi) LOC100255400 (vvi) LOC100256928 (vvi) LOC100258882 (vvi) LOC100265584 (vvi) LOC100777512 (gma) LOC100777919 (gma) LOC100778062 (gma) LOC100778420 (gma) LOC100781818 (gma) LOC100789435 (gma) LOC100793769 (gma) LOC100795807 (gma) LOC100796249 (gma) LOC100807278 (gma) LOC100811076 (gma) LOC100811865 (gma) LOC100812093 (gma) LOC100813712 (gma) LOC100818504 (gma) LOC100852554 (vvi) LOC101244875 (sly) LOC101248205 (sly) LOC101256290 (sly) LOC101263217 (sly) LOC101266330 (sly) LOC102663208 (gma) LOC102669831 (gma) LOC103833524 (bra) LOC103836144 (bra) LOC103836146 (bra) LOC103836151 (bra) LOC103838039 (bra) LOC103838041 (bra) LOC103838174 (bra) LOC103838255 (bra) LOC103838258 (bra) LOC103838282 (bra) LOC103838376 (bra) LOC103839829 (bra) LOC103843088 (bra) LOC103843103 (bra) LOC103843107 (bra) LOC103843127 (bra) LOC103843546 (bra) LOC103846313 (bra) LOC103864061 (bra) LOC103866658 (bra) LOC103871206 (bra) LOC104879278 (vvi) LOC106796589 (gma) LOC112417994 (mtr) LOC112422668 (mtr) LOC112999808 (gma)

Subcellular
localization
wolf

chlo 4, chlo_mito 4, mito 3, cyto_mito 1, cyto 1

(predict for NP_176639.2)

Subcellular
localization
TargetP

mito 5

(predict for NP_176639.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G64580 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.6	AT1G22960	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	838903
5.6	AT5G59900	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	836112
5.4	AT3G51320	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	824295

Coexpressed
gene list

[Coexpressed gene list for AT1G64580]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

262007_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

262007_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

262007_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	842766
Refseq ID (protein)	NP_176639.2

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