cis; CCGACCT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
CCGAC   LTRECOREATCOR15 [ref] [ref] [ref] [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCGACCT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCGACCT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.58At5g62020heat shock factor protein, putative (HSF6) / heat shock transcription factor, putative (HTSF6) ((AT-HSFB2A)) HSF
0.52At3g10800bZIP transcription factor family protein bZIP
0.52At3g28210zinc finger (AN1-like) family protein ((PMZ)) C2H2
0.50At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.50At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.50At5g01380expressed protein Trihelix
0.49At2g26150heat shock transcription factor family protein ((ATHSFA2)) HSF
0.49At5g05410DRE-binding protein (DREB2A) ((DREB2A)) AP2-EREBP
-0.48At4g13100zinc finger (C3HC4-type RING finger) family protein C3H
0.48At1g22985AP2 domain-containing transcription factor, putative AP2-EREBP
0.48At5g04410no apical meristem (NAM) family protein ((NAC2)) NAC
0.47At1g32870no apical meristem (NAM) family protein NAC
0.47At3g46070zinc finger (C2H2 type) family protein C2H2
0.47At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC
0.46At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC

link to other 304 cis elements in ATTED

similar seq.
CCGACCT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AGGTCGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCGACCT1.000.0786
CACGCGG0.850.0740
CACGCGT0.770.0774
TGCCGAC0.750.0830
AACCGAC0.750.0726
ACGCGTC0.720.0790
CGCGTCA0.720.07193
AACACGT0.710.0794
TAACGCG0.710.0762
ACGCGGT0.700.09141