cis; AACCGAC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
 ACCGAC DRE2COREZMRAB17 [ref] [ref] [ref]
 RCCGAC DRECRTCOREAT [ref] [ref] [ref] [ref] [ref]
  CCGAC LTRECOREATCOR15 [ref] [ref] [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AACCGAC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AACCGAC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.57At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
-0.56At4g13100zinc finger (C3HC4-type RING finger) family protein C3H
0.55At3g10800bZIP transcription factor family protein bZIP
0.54At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.52At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.52At5g01380expressed protein Trihelix
0.51At4g36900AP2 domain-containing protein RAP2.10 (RAP2.10) AP2-EREBP
0.51At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.51At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.50At1g50600scarecrow-like transcription factor 5 (SCL5) GRAS
0.50At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.50At5g48655zinc finger (C3HC4-type RING finger) family protein C3H
0.50At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.49At1g43160AP2 domain-containing protein RAP2.6 (RAP2.6) AP2-EREBP
0.49At4g33940zinc finger (C3HC4-type RING finger) family protein C3H

link to other 304 cis elements in ATTED

similar seq.
←AACCGAC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GTCGGTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AACCGAC1.000.0726
ACCGACT0.820.0743
CACGCGG0.790.0740
CCGACCT0.750.0786
CACGCGT0.690.0774
GCCGACC0.680.0781
CGCGGTT0.660.0716
CCACCTG0.630.08134
GTCGGTT0.600.0695