cis; GTCGGTT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GTCGGTT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GTCGGTT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.43At3g21175zinc finger (GATA type) family protein ((ZML1)) C2C2-Gata
0.43At5g42520expressed protein BBR%2FBPC
0.42At1g54830CCAAT-box binding transcription factor Hap5a, putative CCAAT-HAP5
0.41At1g49560myb family transcription factor G2-like
0.41At2g21240expressed protein BBR%2FBPC
0.40At2g03340WRKY family transcription factor ((WRKY3)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←GTCGGTT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AACCGAC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GTCGGTT1.000.0695
ACCGACT0.660.0743
GTCGGTA0.610.06189
AACCGAC0.600.0726