cis; GTCGGTA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GTCGGTA

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GTCGGTA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.54At1g28050zinc finger (B-box type) family protein C2C2-CO-like
0.53At1g76580SPL1-Related3 protein (SPL1R3) SBP
0.52At2g23340AP2 domain-containing transcription factor, putative AP2-EREBP
0.51At3g46640myb family transcription factor G2-like
0.49At5g05410DRE-binding protein (DREB2A) ((DREB2A)) AP2-EREBP
0.48At2g40350AP2 domain-containing transcription factor, putative (DREB2) AP2-EREBP
0.47At1g49720ABA-responsive element-binding protein / abscisic acid responsive elements-binding factor (ABRE) ((ABF1)) bZIP
0.46At3g11020DRE-binding protein (DREB2B) ((DREB2B)) AP2-EREBP
0.45At3g02990heat shock factor protein 2 (HSF2) / heat shock transcription factor 2 (HSTF2) ((ATHSFA1E)) HSF
0.45At1g53320F-box family protein / tubby family protein (TULP7) TUB
0.44At1g77450no apical meristem (NAM) family protein NAC
0.43At4g36900AP2 domain-containing protein RAP2.10 (RAP2.10) AP2-EREBP
0.43At2g37580zinc finger (C3HC4-type RING finger) family protein C3H
0.42At5g17490gibberellin response modulator, putative / gibberellin-responsive modulator, putative ((RGL3)) GRAS
0.41At3g22830heat shock transcription factor family protein ((AT-HSFA6B)) HSF

link to other 304 cis elements in ATTED

similar seq.
GTCGGTA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TACCGAC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GTCGGTA1.000.06189
ATGTCGG0.760.07111
CCGACAT0.710.0788
GCCGACA0.690.08121
TGCCGAC0.670.0830
ACCGACT0.670.0743
GTCGGTC0.640.07175
CACCGAC0.610.07198
CACGCGT0.610.0774
GTCGGTT0.610.0695