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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100780518   DEAD-box ATP-dependent RNA helicase 22 
 gma-r.7   100780518   DEAD-box ATP-dependent RNA helicase 22 
 mtr-u.5   11406042   pentatricopeptide repeat-containing protein At3g16610 
 ppo-u.5   18111160   pentatricopeptide repeat-containing protein At3g16610 
 bra-r.6   103839938   pentatricopeptide repeat-containing protein At3g16610 
 vvi-u.5   100251168   pentatricopeptide repeat-containing protein At3g16610 
 sot-r.1   102590843   pentatricopeptide repeat-containing protein At3g16610 
 nta-r.1   107762089   pentatricopeptide repeat-containing protein At3g16610-like 
 nta-r.1   107825516   pentatricopeptide repeat-containing protein At3g16610-like 
 osa-u.5   4327814   pentatricopeptide repeat-containing protein At3g16610 
 hvu-r.1   123429313   pentatricopeptide repeat-containing protein At3g16610-like 
 sbi-r.1   8057214   pentatricopeptide repeat-containing protein At3g16610 
 bdi-r.1   100823257   pentatricopeptide repeat-containing protein At3g16610 

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Top 50 coexpressed genes to 100780518 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100780518 (gma-u.5 coexpression data)

CoexMap"100780518"


gmaLOC100780518 | Entrez gene ID : 100780518      
Species gma mtr ppo bra vvi sot nta osa hvu sbi bdi cre ath bna tae zma cit sly ghi
Paralog 2 1 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (107 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003530661.1 [sequence] [blastp]
XP_006585977.2 [sequence] [blastp]
XP_014634815.1 [sequence] [blastp]
XP_014634816.1 [sequence] [blastp]
XP_040874449.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_003530661.1)
chlo 7,  mito 1,  cyto_mito 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_006585977.2)
chlo 7,  mito 1,  cyto_mito 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_014634815.1)
chlo 7,  mito 1,  cyto_mito 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_014634816.1)
chlo 9,  mito 1  (predict for XP_040874449.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_003530661.1)
mito 4  (predict for XP_006585977.2)
mito 4  (predict for XP_014634815.1)
mito 4  (predict for XP_014634816.1)
mito 4  (predict for XP_040874449.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100780518
gma-r.7
for
100780518
mtr-u.5
for
11406042
ppo-u.5
for
18111160
bra-r.6
for
103839938
vvi-u.5
for
100251168
sot-r.1
for
102590843
nta-r.1
for
107762089
nta-r.1
for
107825516
osa-u.5
for
4327814
hvu-r.1
for
123429313
sbi-r.1
for
8057214
bdi-r.1
for
100823257


Ortholog ID: 12430
Species gma mtr ppo bra vvi sot nta nta osa hvu sbi bdi
Symbol LOC100780518 LOC11406042 LOC18111160 LOC103839938 LOC100251168 LOC102590843 LOC107762089 LOC107825516 LOC4327814 LOC123429313 LOC8057214 LOC100823257
Function* DEAD-box ATP-dependent RNA helicase 22 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780518 11406042 18111160 103839938 100251168 102590843 107762089 107825516 4327814 123429313 8057214 100823257
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