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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  100780518  DEAD-box ATP-dependent RNA helicase 22 
 gma-r.7  100780518  DEAD-box ATP-dependent RNA helicase 22 
 mtr-u.5  11406042  pentatricopeptide repeat-containing protein At3g16610 
 ppo-u.5  18111160  pentatricopeptide repeat-containing protein At3g16610 
 vvi-u.5  100251168  pentatricopeptide repeat-containing protein At3g16610 
 osa-u.5  4327814  pentatricopeptide repeat-containing protein At3g16610 

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Top 50 coexpressed genes to 100780518 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100780518 (gma-u.5 coexpression data)

CoexMap"100780518"


gmaLOC100780518 | Entrez gene ID : 100780518
Species gma mtr ppo vvi osa sly sbi nta bra cre hvu cit bdi sot zma tae ath bna ghi
Paralog 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (107 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003530661.1 [sequence] [blastp]
XP_006585977.2 [sequence] [blastp]
XP_014634815.1 [sequence] [blastp]
XP_014634816.1 [sequence] [blastp]
XP_040874449.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_003530661.1)
chlo 7,  mito 1,  cyto_mito 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_006585977.2)
chlo 7,  mito 1,  cyto_mito 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_014634815.1)
chlo 7,  mito 1,  cyto_mito 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_014634816.1)
chlo 9,  mito 1  (predict for XP_040874449.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_003530661.1)
mito 4  (predict for XP_006585977.2)
mito 4  (predict for XP_014634815.1)
mito 4  (predict for XP_014634816.1)
mito 4  (predict for XP_040874449.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100780518

.

gma-r.7
for
100780518

.

mtr-u.5
for
11406042

.

ppo-u.5
for
18111160

.

vvi-u.5
for
100251168

.

osa-u.5
for
4327814

.


Ortholog ID: 12430
Species gma osa bra vvi ppo mtr hvu sbi sot bdi nta nta
Symbol LOC100780518 LOC4327814 LOC103839938 LOC100251168 LOC18111160 LOC11406042 LOC123429313 LOC8057214 LOC102590843 LOC100823257 LOC107825516 LOC107762089
Function* DEAD-box ATP-dependent RNA helicase 22 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780518 4327814 103839938 100251168 18111160 11406042 123429313 8057214 102590843 100823257 107825516 107762089
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