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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107762089   pentatricopeptide repeat-containing protein At3g16610-like 
 gma-u.5   100780518   DEAD-box ATP-dependent RNA helicase 22 
 vvi-u.5   100251168   pentatricopeptide repeat-containing protein At3g16610 
 ppo-u.5   18111160   pentatricopeptide repeat-containing protein At3g16610 
 mtr-u.5   11406042   pentatricopeptide repeat-containing protein At3g16610 
 osa-u.5   4327814   pentatricopeptide repeat-containing protein At3g16610 

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Top 50 coexpressed genes to 107762089 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107762089 (nta-r.1 coexpression data)

CoexMap"107762089"


ntaLOC107762089 | Entrez gene ID : 107762089      
Species nta gma vvi ppo mtr osa hvu zma bna sly cit bra ghi sbi bdi ath tae cre sot
Paralog 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016435897.2 [sequence] [blastp]
XP_016435898.2 [sequence] [blastp]
XP_016435899.2 [sequence] [blastp]
XP_016435901.2 [sequence] [blastp]
XP_075073642.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 4,  chlo 2  (predict for XP_016435897.2)
mito 6,  chlo_mito 4,  chlo 2  (predict for XP_016435898.2)
mito 6,  chlo_mito 4,  chlo 2  (predict for XP_016435899.2)
mito 6,  chlo_mito 4,  chlo 2  (predict for XP_016435901.2)
mito 6,  chlo_mito 4,  chlo 2  (predict for XP_075073642.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_016435897.2)
mito 5,  other 4  (predict for XP_016435898.2)
mito 5,  other 4  (predict for XP_016435899.2)
mito 5,  other 4  (predict for XP_016435901.2)
mito 5,  other 4  (predict for XP_075073642.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107762089
gma-u.5
for
100780518
vvi-u.5
for
100251168
ppo-u.5
for
18111160
mtr-u.5
for
11406042
osa-u.5
for
4327814


Ortholog ID: 12430
Species nta nta sot gma bra vvi ppo mtr osa hvu sbi bdi
Symbol LOC107825516 LOC107762089 LOC102590843 LOC100780518 LOC103839938 LOC100251168 LOC18111160 LOC11406042 LOC4327814 LOC123429313 LOC8057214 LOC100823257
Function* pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610 DEAD-box ATP-dependent RNA helicase 22 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107825516 107762089 102590843 100780518 103839938 100251168 18111160 11406042 4327814 123429313 8057214 100823257
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