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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5  11406042  pentatricopeptide repeat-containing protein At3g16610 
 mtr-r.5  11406042  pentatricopeptide repeat-containing protein At3g16610 
 gma-u.5  100780518  DEAD-box ATP-dependent RNA helicase 22 
 ppo-u.5  18111160  pentatricopeptide repeat-containing protein At3g16610 
 vvi-u.5  100251168  pentatricopeptide repeat-containing protein At3g16610 
 osa-u.5  4327814  pentatricopeptide repeat-containing protein At3g16610 

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Top 50 coexpressed genes to 11406042 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11406042 (mtr-u.5 coexpression data)

CoexMap"11406042"


mtrLOC11406042 | Entrez gene ID : 11406042
Species mtr gma ppo vvi osa hvu zma bna sly cit bra ghi sbi bdi ath nta tae cre sot
Paralog 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (919 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003631155.1 [sequence] [blastp]
XP_024628512.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  cyto_mito 3,  chlo 3,  nucl 1  (predict for XP_003631155.1)
mito 5,  cyto_mito 3,  chlo 3,  nucl 1  (predict for XP_024628512.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_003631155.1)
mito 9  (predict for XP_024628512.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

mtr-u.5
for
11406042


mtr-r.5
for
11406042


gma-u.5
for
100780518


ppo-u.5
for
18111160


vvi-u.5
for
100251168


osa-u.5
for
4327814



Ortholog ID: 12430
Species mtr gma ppo bra vvi sot nta nta osa hvu sbi bdi
Symbol LOC11406042 LOC100780518 LOC18111160 LOC103839938 LOC100251168 LOC102590843 LOC107825516 LOC107762089 LOC4327814 LOC123429313 LOC8057214 LOC100823257
Function* pentatricopeptide repeat-containing protein At3g16610 DEAD-box ATP-dependent RNA helicase 22 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11406042 100780518 18111160 103839938 100251168 102590843 107825516 107762089 4327814 123429313 8057214 100823257
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