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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18111160   pentatricopeptide repeat-containing protein At3g16610 
 ppo-r.4   18111160   pentatricopeptide repeat-containing protein At3g16610 
 gma-u.5   100780518   DEAD-box ATP-dependent RNA helicase 22 
 mtr-u.5   11406042   pentatricopeptide repeat-containing protein At3g16610 
 vvi-u.5   100251168   pentatricopeptide repeat-containing protein At3g16610 
 osa-u.5   4327814   pentatricopeptide repeat-containing protein At3g16610 

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Top 50 coexpressed genes to 18111160 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18111160 (ppo-u.5 coexpression data)

CoexMap"18111160"


ppoLOC18111160 | Entrez gene ID : 18111160    
Species ppo gma mtr vvi osa hvu sot tae nta bra cit ghi zma bna bdi sly ath sbi cre
Paralog 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_006389523.1 [sequence] [blastp]
XP_024452576.1 [sequence] [blastp]
XP_024452577.1 [sequence] [blastp]
XP_024452578.1 [sequence] [blastp]
XP_024452579.1 [sequence] [blastp]
XP_024452580.1 [sequence] [blastp]
XP_024452581.1 [sequence] [blastp]
XP_024452582.1 [sequence] [blastp]
XP_024452583.1 [sequence] [blastp]
XP_024452584.1 [sequence] [blastp]
XP_024452585.1 [sequence] [blastp]
XP_024452586.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_006389523.1)
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_024452576.1)
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_024452577.1)
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_024452578.1)
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_024452579.1)
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_024452580.1)
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_024452581.1)
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_024452582.1)
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_024452583.1)
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_024452584.1)
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_024452585.1)
chlo 5,  nucl 1,  extr 1,  E.R. 1  (predict for XP_024452586.1)
Subcellular
localization
TargetP
mito 6,  scret 5  (predict for XP_006389523.1)
mito 6,  scret 5  (predict for XP_024452576.1)
mito 6,  scret 5  (predict for XP_024452577.1)
mito 6,  scret 5  (predict for XP_024452578.1)
mito 6,  scret 5  (predict for XP_024452579.1)
mito 6,  scret 5  (predict for XP_024452580.1)
mito 6,  scret 5  (predict for XP_024452581.1)
mito 6,  scret 5  (predict for XP_024452582.1)
mito 6,  scret 5  (predict for XP_024452583.1)
mito 6,  scret 5  (predict for XP_024452584.1)
mito 6,  scret 5  (predict for XP_024452585.1)
mito 6,  scret 5  (predict for XP_024452586.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18111160

.
ppo-r.4
for
18111160

.
gma-u.5
for
100780518

.
mtr-u.5
for
11406042

.
vvi-u.5
for
100251168

.
osa-u.5
for
4327814

.


Ortholog ID: 12430
Species gma osa bra vvi ppo mtr hvu sbi sot bdi nta nta
Symbol LOC100780518 LOC4327814 LOC103839938 LOC100251168 LOC18111160 LOC11406042 LOC123429313 LOC8057214 LOC102590843 LOC100823257 LOC107825516 LOC107762089
Function* DEAD-box ATP-dependent RNA helicase 22 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780518 4327814 103839938 100251168 18111160 11406042 123429313 8057214 102590843 100823257 107825516 107762089
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