Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5  4327814  pentatricopeptide repeat-containing protein At3g16610 
 osa-r.6  4327814  pentatricopeptide repeat-containing protein At3g16610 
 osa-m.8  4327814  pentatricopeptide repeat-containing protein At3g16610 
 osa-e.1  4327814  pentatricopeptide repeat-containing protein At3g16610 
 gma-u.5  100780518  DEAD-box ATP-dependent RNA helicase 22 
 vvi-u.5  100251168  pentatricopeptide repeat-containing protein At3g16610 
 ppo-u.5  18111160  pentatricopeptide repeat-containing protein At3g16610 
 mtr-u.5  11406042  pentatricopeptide repeat-containing protein At3g16610 

close


Top 50 coexpressed genes to 4327814 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 4327814 (osa-u.5 coexpression data)

CoexMap"4327814"


osaLOC4327814 | Entrez gene ID : 4327814
Species osa gma vvi ppo mtr bdi hvu bra cit bna ath sbi sly ghi sot nta cre tae zma
Paralog 4 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (252 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5729 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (840 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015630749.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_015630749.1)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for XP_015630749.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

osa-u.5
for
4327814


osa-r.6
for
4327814


osa-m.8
for
4327814


osa-e.1
for
4327814


gma-u.5
for
100780518


vvi-u.5
for
100251168


ppo-u.5
for
18111160


mtr-u.5
for
11406042



Ortholog ID: 12430
Species osa hvu bdi sbi gma bra vvi ppo mtr sot nta nta
Symbol LOC4327814 LOC123429313 LOC100823257 LOC8057214 LOC100780518 LOC103839938 LOC100251168 LOC18111160 LOC11406042 LOC102590843 LOC107825516 LOC107762089
Function* pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 DEAD-box ATP-dependent RNA helicase 22 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4327814 123429313 100823257 8057214 100780518 103839938 100251168 18111160 11406042 102590843 107825516 107762089
The preparation time of this page was 0.1 [sec].