ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	OTP81	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-u.5	OTP81	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-r.7	OTP81	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-e.2	OTP81	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.bio	OTP81	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.hor	OTP81	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.lig	OTP81	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.str	OTP81	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.tis	OTP81	Tetratricopeptide repeat (TPR)-like superfamily protein
bra-r.6	103868004	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
bna-r.1	125594735	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
bna-r.1	125602932	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
bna-r.1	106434117	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
ghi-r.1	107959183	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
ghi-r.1	107906613	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
cit-r.1	102631065	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
cit-r.1	102623637	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like
gma-u.5	100795459	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
vvi-u.5	100262644	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
vvi-u.5	100263911	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
ppo-u.5	7468568	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
ppo-u.5	18107640	pentatricopeptide repeat-containing protein At1g08070, chloroplastic
sly-u.5	101257180	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
sot-r.1	102587393	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
nta-r.1	107794088	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
nta-r.1	107787434	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
tae-r.2	123045769	pentatricopeptide repeat-containing protein At1g08070, chloroplastic
bdi-r.1	100839670	pentatricopeptide repeat-containing protein At5g48910

Annotation

functional annotation

KEGG

GO BP

GO:0031425 [list] [network] chloroplast RNA processing

(28 genes)

IMP

GO CC

GO:0009507 [list] [network] chloroplast

(5014 genes)

IDA ISM

GO MF

GO:0008270 [list] [network] zinc ion binding	(391 genes)	IEA
GO:0003729 [list] [network] mRNA binding	(1514 genes)	IDA

Protein

NP_180537.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 4, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1

(predict for NP_180537.1)

Subcellular
localization
TargetP

chlo 8

(predict for NP_180537.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for OTP81	ath-u.5 for OTP81	ath-r.7 for OTP81	ath-e.2 for OTP81	ath-m.4.bio for OTP81	ath-m.4.hor for OTP81	ath-m.4.lig for OTP81	ath-m.4.str for OTP81	ath-m.4.tis for OTP81	bra-r.6 for 103868004	bna-r.1 for 125594735	bna-r.1 for 125602932	bna-r.1 for 106434117	ghi-r.1 for 107959183	ghi-r.1 for 107906613	cit-r.1 for 102631065	cit-r.1 for 102623637	gma-u.5 for 100795459	vvi-u.5 for 100262644	vvi-u.5 for 100263911	ppo-u.5 for 7468568	ppo-u.5 for 18107640	sly-u.5 for 101257180	sot-r.1 for 102587393	nta-r.1 for 107794088	nta-r.1 for 107787434	tae-r.2 for 123045769	bdi-r.1 for 100839670

Ortholog

Ortholog ID: 11253

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

sly

sot

nta

tae

bdi

Symbol

OTP81

Function^*

Tetratricopeptide repeat (TPR)-like superfamily protein