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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107794088   pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like 
 sly-u.5   101257180   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 ath-u.5   OTP81   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100795459   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 vvi-u.5   100263911   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 vvi-u.5   100262644   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 ppo-u.5   18107640   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ppo-u.5   7468568   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 

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Top 50 coexpressed genes to 107794088 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107794088 (nta-r.1 coexpression data)

CoexMap"107794088"


ntaLOC107794088 | Entrez gene ID : 107794088      
Species nta sly ath gma vvi ppo bdi mtr bra hvu cit bna sbi ghi osa sot cre tae zma
Paralog 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016472031.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_016472031.2)
Subcellular
localization
TargetP
other 7,  mito 5  (predict for XP_016472031.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107794088
sly-u.5
for
101257180
ath-u.5
for
OTP81
gma-u.5
for
100795459
vvi-u.5
for
100263911
vvi-u.5
for
100262644
ppo-u.5
for
18107640
ppo-u.5
for
7468568


Ortholog ID: 11253
Species nta nta sly sot ath gma bra vvi ppo ppo ghi ghi bna bna cit cit tae bdi
Symbol LOC107794088 LOC107787434 LOC101257180 LOC102587393 OTP81 LOC100795459 LOC103868004 LOC100263911 LOC7468568 LOC18107640 LOC107906613 LOC107959183 LOC106434117 LOC125594735 LOC102623637 LOC102631065 LOC123045769 LOC100839670
Function* pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At5g48910
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
ppo01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107794088 107787434 101257180 102587393 817526 100795459 103868004 100263911 7468568 18107640 107906613 107959183 106434117 125594735 102623637 102631065 123045769 100839670
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