ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100263911	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
vvi-r.5	100263911	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
vvi-u.5	100262644	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
ath-u.5	OTP81	Tetratricopeptide repeat (TPR)-like superfamily protein
gma-u.5	100795459	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
bra-r.6	103868004	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
ppo-u.5	18107640	pentatricopeptide repeat-containing protein At1g08070, chloroplastic
ppo-u.5	7468568	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
ghi-r.1	107959183	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
ghi-r.1	107906613	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
bna-r.1	125602932	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
bna-r.1	125594735	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
bna-r.1	106434117	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
cit-r.1	102631065	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
cit-r.1	102623637	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like
sly-u.5	101257180	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
sot-r.1	102587393	pentatricopeptide repeat-containing protein At2g29760, chloroplastic
nta-r.1	107787434	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
nta-r.1	107794088	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
tae-r.2	123045769	pentatricopeptide repeat-containing protein At1g08070, chloroplastic
bdi-r.1	100839670	pentatricopeptide repeat-containing protein At5g48910

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(500 genes)

IEA

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(811 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1286 genes)	IEA
GO:0005515 [list] [network] protein binding	(4232 genes)	IEA

Protein

XP_002279360.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 1, vacu 1, E.R. 1, E.R._vacu 1

(predict for XP_002279360.1)

Subcellular
localization
TargetP

chlo 4

(predict for XP_002279360.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100263911	vvi-r.5 for 100263911	vvi-u.5 for 100262644	ath-u.5 for OTP81	gma-u.5 for 100795459	bra-r.6 for 103868004	ppo-u.5 for 18107640	ppo-u.5 for 7468568	ghi-r.1 for 107959183	ghi-r.1 for 107906613	bna-r.1 for 125602932	bna-r.1 for 125594735	bna-r.1 for 106434117	cit-r.1 for 102631065	cit-r.1 for 102623637	sly-u.5 for 101257180	sot-r.1 for 102587393	nta-r.1 for 107787434	nta-r.1 for 107794088	tae-r.2 for 123045769	bdi-r.1 for 100839670

Ortholog

Ortholog ID: 11253

Species

vvi

ath

gma

bra

ppo

ghi

bna

cit

sly

sot

nta

tae

bdi

Symbol

OTP81

Function^*