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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100795459   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 gma-r.7   100795459   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 ppo-u.5   7468568   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 ppo-u.5   18107640   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ath-u.5   OTP81   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100262644   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 vvi-u.5   100263911   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 sly-u.5   101257180   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 

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Top 50 coexpressed genes to 100795459 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100795459 (gma-u.5 coexpression data)

CoexMap"100795459"


gmaLOC100795459 | Entrez gene ID : 100795459      
Species gma ppo ath vvi sly sbi nta mtr osa cre cit bra hvu bdi sot zma tae bna ghi
Paralog 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031425 [list] [network] chloroplast RNA processing  (2 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003520267.1 [sequence] [blastp]
XP_006575137.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 2  (predict for XP_003520267.1)
chlo 6,  mito 4  (predict for XP_006575137.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_003520267.1)
other 6,  mito 5  (predict for XP_006575137.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100795459

.
gma-r.7
for
100795459

.
ppo-u.5
for
7468568

.
ppo-u.5
for
18107640

.
ath-u.5
for
OTP81

.
vvi-u.5
for
100262644

.
vvi-u.5
for
100263911

.
sly-u.5
for
101257180

.


Ortholog ID: 11253
Species ath gma sly bra vvi ppo ppo tae ghi ghi bna bna sot cit cit bdi nta nta
Symbol OTP81 LOC100795459 LOC101257180 LOC103868004 LOC100263911 LOC7468568 LOC18107640 LOC123045769 LOC107906613 LOC107959183 LOC106434117 LOC125594735 LOC102587393 LOC102623637 LOC102631065 LOC100839670 LOC107794088 LOC107787434
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At5g48910 pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817526 100795459 101257180 103868004 100263911 7468568 18107640 123045769 107906613 107959183 106434117 125594735 102587393 102623637 102631065 100839670 107794088 107787434
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