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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1  102623637  pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 ath-u.5  OTP81  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100795459  pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 vvi-u.5  100262644  pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 vvi-u.5  100263911  pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 ppo-u.5  18107640  pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ppo-u.5  7468568  pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 sly-u.5  101257180  pentatricopeptide repeat-containing protein At2g29760, chloroplastic 

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Top 50 coexpressed genes to 102623637 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102623637 (cit-r.1 coexpression data)

CoexMap"102623637"


citLOC102623637 | Entrez gene ID : 102623637
Species cit ath gma vvi ppo sly bdi mtr bra hvu bna sbi ghi osa sot nta cre tae zma
Paralog 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006476888.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  E.R. 1  (predict for XP_006476888.2)
Subcellular
localization
TargetP
other 7  (predict for XP_006476888.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cit-r.1
for
102623637


ath-u.5
for
OTP81


gma-u.5
for
100795459


vvi-u.5
for
100262644


vvi-u.5
for
100263911


ppo-u.5
for
18107640


ppo-u.5
for
7468568


sly-u.5
for
101257180



Ortholog ID: 11253
Species cit cit ath bra ghi ghi bna bna gma vvi ppo ppo sly sot nta nta tae bdi
Symbol LOC102623637 LOC102631065 OTP81 LOC103868004 LOC107906613 LOC107959183 LOC106434117 LOC125594735 LOC100795459 LOC100263911 LOC7468568 LOC18107640 LOC101257180 LOC102587393 LOC107794088 LOC107787434 LOC123045769 LOC100839670
Function* pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At5g48910
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102623637 102631065 817526 103868004 107906613 107959183 106434117 125594735 100795459 100263911 7468568 18107640 101257180 102587393 107794088 107787434 123045769 100839670
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