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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1  8057214  pentatricopeptide repeat-containing protein At3g16610 
 osa-u.5  4327814  pentatricopeptide repeat-containing protein At3g16610 
 hvu-r.1  123429313  pentatricopeptide repeat-containing protein At3g16610-like 
 bdi-r.1  100823257  pentatricopeptide repeat-containing protein At3g16610 
 gma-u.5  100780518  DEAD-box ATP-dependent RNA helicase 22 
 bra-r.6  103839938  pentatricopeptide repeat-containing protein At3g16610 
 vvi-u.5  100251168  pentatricopeptide repeat-containing protein At3g16610 
 ppo-u.5  18111160  pentatricopeptide repeat-containing protein At3g16610 
 mtr-u.5  11406042  pentatricopeptide repeat-containing protein At3g16610 
 sot-r.1  102590843  pentatricopeptide repeat-containing protein At3g16610 
 nta-r.1  107762089  pentatricopeptide repeat-containing protein At3g16610-like 
 nta-r.1  107825516  pentatricopeptide repeat-containing protein At3g16610-like 

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Top 50 coexpressed genes to 8057214 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8057214 (sbi-r.1 coexpression data)

CoexMap"8057214"


sbiLOC8057214 | Entrez gene ID : 8057214
Species sbi osa hvu bdi gma bra vvi ppo mtr sot nta cit sly tae ath bna ghi zma cre
Paralog 1 1 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002464135.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 8,  chlo_mito 5,  chlo 1  (predict for XP_002464135.2)
Subcellular
localization
TargetP
mito 6  (predict for XP_002464135.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sbi-r.1
for
8057214


osa-u.5
for
4327814


hvu-r.1
for
123429313


bdi-r.1
for
100823257


gma-u.5
for
100780518


bra-r.6
for
103839938


vvi-u.5
for
100251168


ppo-u.5
for
18111160


mtr-u.5
for
11406042


sot-r.1
for
102590843


nta-r.1
for
107762089


nta-r.1
for
107825516



Ortholog ID: 12430
Species sbi osa hvu bdi gma bra vvi ppo mtr sot nta nta
Symbol LOC8057214 LOC4327814 LOC123429313 LOC100823257 LOC100780518 LOC103839938 LOC100251168 LOC18111160 LOC11406042 LOC102590843 LOC107762089 LOC107825516
Function* pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610 DEAD-box ATP-dependent RNA helicase 22 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8057214 4327814 123429313 100823257 100780518 103839938 100251168 18111160 11406042 102590843 107762089 107825516
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