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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100191225   AMSH-like ubiquitin thioesterase 2 
 zma-r.6   100191225   AMSH-like ubiquitin thioesterase 2 
 zma-m.5   100191225   AMSH-like ubiquitin thioesterase 2 
 sbi-r.1   110433847   AMSH-like ubiquitin thioesterase 2 
 osa-u.5   4327852   AMSH-like ubiquitin thioesterase 2 
 tae-r.2   123078721   AMSH-like ubiquitin thioesterase 2 
 tae-r.2   123070276   AMSH-like ubiquitin thioesterase 2 
 tae-r.2   123061650   AMSH-like ubiquitin thioesterase 2 
 hvu-r.1   123444022   AMSH-like ubiquitin thioesterase 2 
 bdi-r.1   100844070   AMSH-like ubiquitin thioesterase 2 
 ath-u.5   AMSH2   associated molecule with the SH3 domain of STAM 2 
 gma-u.5   100807282   AMSH-like ubiquitin thioesterase 2 
 bra-r.6   103871842   AMSH-like ubiquitin thioesterase 2 
 vvi-u.5   100852697   AMSH-like ubiquitin thioesterase 2 
 ppo-u.5   7492397   AMSH-like ubiquitin thioesterase 2 
 mtr-u.5   11406347   AMSH-like ubiquitin thioesterase 2 
 ghi-r.1   107909669   AMSH-like ubiquitin thioesterase 2 
 ghi-r.1   107886586   AMSH-like ubiquitin thioesterase 2 
 bna-r.1   106381015   AMSH-like ubiquitin thioesterase 2 
 bna-r.1   106357924   AMSH-like ubiquitin thioesterase 2 
 bna-r.1   125575362   AMSH-like ubiquitin thioesterase 3 
 sot-r.1   102579319   AMSH-like ubiquitin thioesterase 2 
 cit-r.1   102615340   AMSH-like ubiquitin thioesterase 2 
 nta-r.1   107813862   AMSH-like ubiquitin thioesterase 2 
 cre-r.1   CHLRE_01g024300v5   uncharacterized protein 

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Top 50 coexpressed genes to 100191225 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100191225 (zma-u.5 coexpression data)

CoexMap"100191225"


zmaLOC100191225 | Entrez gene ID : 100191225      
Species zma sbi osa tae hvu bdi ath gma bra vvi ppo mtr ghi bna sot cit nta cre sly
Paralog 3 1 1 3 1 1 1 1 1 1 1 1 2 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma04144 [list] [network] Endocytosis (208 genes)
GO BP
GO:0070536 [list] [network] protein K63-linked deubiquitination  (4 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (181 genes)  IEA  
GO:0016020 [list] [network] membrane  (3751 genes)  IEA  
GO MF
GO:0140492 [list] [network] metal-dependent deubiquitinase activity  (4 genes)  IEA  
GO:0061578 [list] [network] K63-linked deubiquitinase activity  (6 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001130131.1 [sequence] [blastp]
XP_020397416.1 [sequence] [blastp]
XP_035817152.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  cyto 1,  chlo 1,  extr 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001130131.1)
nucl 6,  cyto_nucl 4,  mito 1,  cyto 1,  chlo_mito 1  (predict for XP_020397416.1)
nucl 5,  cyto_nucl 4,  cyto 1,  chlo 1,  extr 1,  chlo_mito 1,  golg_plas 1  (predict for XP_035817152.1)
Subcellular
localization
TargetP
mito 7,  other 6  (predict for NP_001130131.1)
mito 7  (predict for XP_020397416.1)
mito 7,  other 6  (predict for XP_035817152.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100191225
zma-r.6
for
100191225
zma-m.5
for
100191225
sbi-r.1
for
110433847
osa-u.5
for
4327852
tae-r.2
for
123078721
tae-r.2
for
123070276
tae-r.2
for
123061650
hvu-r.1
for
123444022
bdi-r.1
for
100844070
ath-u.5
for
AMSH2
gma-u.5
for
100807282
bra-r.6
for
103871842
vvi-u.5
for
100852697
ppo-u.5
for
7492397
mtr-u.5
for
11406347
ghi-r.1
for
107909669
ghi-r.1
for
107886586
bna-r.1
for
106381015
bna-r.1
for
106357924
bna-r.1
for
125575362
sot-r.1
for
102579319
cit-r.1
for
102615340
nta-r.1
for
107813862
cre-r.1
for
CHLRE_01g024300v5


Ortholog ID: 10445
Species zma sbi osa tae tae tae hvu bdi ath gma bra vvi ppo mtr ghi ghi bna bna bna sot cit nta cre
Symbol LOC100191225 LOC110433847 LOC4327852 LOC123078721 LOC123070276 LOC123061650 LOC123444022 LOC100844070 AMSH2 LOC100807282 LOC103871842 LOC100852697 LOC7492397 LOC11406347 LOC107909669 LOC107886586 LOC106381015 LOC106357924 LOC125575362 LOC102579319 LOC102615340 LOC107813862 CHLRE_01g024300v5
Function* AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 associated molecule with the SH3 domain of STAM 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04075 Plant hormone signal transduction 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
bdi00020 Citrate cycle (TCA cycle) 2
bdi01200 Carbon metabolism 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00310 Lysine degradation 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03018 RNA degradation 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 8
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100191225 110433847 4327852 123078721 123070276 123061650 123444022 100844070 837603 100807282 103871842 100852697 7492397 11406347 107909669 107886586 106381015 106357924 125575362 102579319 102615340 107813862 5715257
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