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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123444022   AMSH-like ubiquitin thioesterase 2 
 osa-u.5   4327852   AMSH-like ubiquitin thioesterase 2 
 zma-u.5   100191225   AMSH-like ubiquitin thioesterase 2 
 ath-u.5   AMSH2   associated molecule with the SH3 domain of STAM 2 
 gma-u.5   100807282   AMSH-like ubiquitin thioesterase 2 
 vvi-u.5   100852697   AMSH-like ubiquitin thioesterase 2 
 ppo-u.5   7492397   AMSH-like ubiquitin thioesterase 2 
 mtr-u.5   11406347   AMSH-like ubiquitin thioesterase 2 

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Top 50 coexpressed genes to 123444022 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123444022 (hvu-r.1 coexpression data)

CoexMap"123444022"


hvuLOC123444022 | Entrez gene ID : 123444022    
Species hvu osa zma ath gma vvi ppo mtr bdi bra cit bna sbi sly ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg04144 [list] [network] Endocytosis (148 genes)
GO BP
GO:0070536 [list] [network] protein K63-linked deubiquitination  (3 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (168 genes)  IEA  
GO:0016020 [list] [network] membrane  (3800 genes)  IEA  
GO MF
GO:0140492 [list] [network] metal-dependent deubiquitinase activity  (3 genes)  IEA  
GO:0061578 [list] [network] K63-linked deubiquitinase activity  (4 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044976551.1 [sequence] [blastp]
XP_044976552.1 [sequence] [blastp]
XP_044976553.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto_nucl 5,  cyto 1  (predict for XP_044976551.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for XP_044976552.1)
nucl 7,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_044976553.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_044976551.1)
mito 7,  other 5  (predict for XP_044976552.1)
other 7,  mito 3  (predict for XP_044976553.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123444022
osa-u.5
for
4327852
zma-u.5
for
100191225
ath-u.5
for
AMSH2
gma-u.5
for
100807282
vvi-u.5
for
100852697
ppo-u.5
for
7492397
mtr-u.5
for
11406347


Ortholog ID: 10445
Species hvu tae tae bdi osa zma sbi ath gma bra vvi ppo mtr ghi ghi bna bna sot cit nta cre
Symbol LOC123444022 LOC123078721 LOC123070276 LOC100844070 LOC4327852 LOC100191225 LOC110433847 AMSH2 LOC100807282 LOC103871842 LOC100852697 LOC7492397 LOC11406347 LOC107909669 LOC107886586 LOC106357924 LOC125575362 LOC102579319 LOC102615340 LOC107813862 CHLRE_01g024300v5
Function* AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 associated molecule with the SH3 domain of STAM 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04075 Plant hormone signal transduction 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
bdi00020 Citrate cycle (TCA cycle) 2
bdi01200 Carbon metabolism 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00310 Lysine degradation 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03018 RNA degradation 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 8
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123444022 123078721 123070276 100844070 4327852 100191225 110433847 837603 100807282 103871842 100852697 7492397 11406347 107909669 107886586 106357924 125575362 102579319 102615340 107813862 5715257
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