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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100280055   uncharacterized LOC100280055 
 zma-r.6   100280055   uncharacterized LOC100280055 
 zma-u.5   100384247   uncharacterized LOC100384247 
 sbi-r.1   8070853   coilin 
 osa-u.5   4352003   coilin 
 tae-r.2   123139527   coilin 
 tae-r.2   123062297   coilin 
 tae-r.2   123182581   coilin 
 hvu-r.1   123447518   coilin 
 bdi-r.1   100832685   coilin 
 ath-u.5   AT1G13030   sphere organelles protein-like protein 
 gma-u.5   100806980   coilin 
 gma-u.5   100776892   coilin 
 sly-u.5   101246716   coilin 
 sly-u.5   101246016   coilin-like 
 bra-r.6   103871964   coilin 
 bra-r.6   103843087   coilin 
 vvi-u.5   100256103   coilin 
 ppo-u.5   18102411   coilin 
 ppo-u.5   7469039   coilin 
 mtr-u.5   11427783   coilin 
 ghi-r.1   107917465   coilin 
 ghi-r.1   107922034   coilin 
 bna-r.1   106412543   coilin 
 bna-r.1   106401970   coilin-like 
 bna-r.1   106401180   coilin 
 sot-r.1   102603469   coilin-like 
 sot-r.1   102604548   coilin 
 cit-r.1   102620183   coilin 
 nta-r.1   107820583   coilin 
 nta-r.1   107800776   coilin-like 
 nta-r.1   107793536   uncharacterized LOC107793536 
 cre-r.1   CHLRE_13g592400v5   uncharacterized protein 

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Top 50 coexpressed genes to 100280055 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100280055 (zma-u.5 coexpression data)

CoexMap"100280055"


zmaLOC100280055 | Entrez gene ID : 100280055      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 2 2 2 1 2 1 2 3 2 1 3 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000387 [list] [network] spliceosomal snRNP assembly  (26 genes)  IEA  
GO CC
GO:0015030 [list] [network] Cajal body  (2 genes)  IEA  
GO MF
GO:0030619 [list] [network] U1 snRNA binding  (7 genes)  IEA  
GO:0030620 [list] [network] U2 snRNA binding  (7 genes)  IEA  
Protein NP_001146467.1 [sequence] [blastp]
XP_020403256.1 [sequence] [blastp]
XP_020403258.1 [sequence] [blastp]
XP_020403259.1 [sequence] [blastp]
XP_020403260.1 [sequence] [blastp]
XP_035820646.1 [sequence] [blastp]
XP_035820647.1 [sequence] [blastp]
XP_035820648.1 [sequence] [blastp]
XP_035820649.1 [sequence] [blastp]
XP_035820650.1 [sequence] [blastp]
XP_035820651.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001146467.1)
nucl 5,  chlo 3,  mito 1  (predict for XP_020403256.1)
nucl 5,  chlo 2,  mito 1,  E.R. 1,  pero 1,  cyto_mito 1,  mito_plas 1  (predict for XP_020403258.1)
nucl 5,  chlo 3,  mito 1  (predict for XP_020403259.1)
nucl 5,  chlo 3,  mito 1  (predict for XP_020403260.1)
nucl 4,  chlo 3,  mito 1,  E.R. 1,  pero 1,  cyto_mito 1,  mito_plas 1  (predict for XP_035820646.1)
nucl 4,  chlo 3,  mito 1,  E.R. 1,  pero 1,  cyto_mito 1,  mito_plas 1  (predict for XP_035820647.1)
nucl 4,  chlo 3,  mito 1,  E.R. 1,  pero 1,  cyto_mito 1,  mito_plas 1  (predict for XP_035820648.1)
nucl 4,  chlo 4,  mito 1  (predict for XP_035820649.1)
chlo 4,  nucl 4,  mito 2  (predict for XP_035820650.1)
nucl 4,  chlo 3,  mito 1,  vacu 1,  pero 1,  cyto_mito 1,  mito_plas 1  (predict for XP_035820651.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001146467.1)
chlo 6  (predict for XP_020403256.1)
chlo 6  (predict for XP_020403258.1)
chlo 6  (predict for XP_020403259.1)
chlo 6  (predict for XP_020403260.1)
chlo 5  (predict for XP_035820646.1)
chlo 5  (predict for XP_035820647.1)
chlo 5  (predict for XP_035820648.1)
chlo 5  (predict for XP_035820649.1)
chlo 6  (predict for XP_035820650.1)
chlo 6  (predict for XP_035820651.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100280055
zma-r.6
for
100280055
zma-u.5
for
100384247
sbi-r.1
for
8070853
osa-u.5
for
4352003
tae-r.2
for
123139527
tae-r.2
for
123062297
tae-r.2
for
123182581
hvu-r.1
for
123447518
bdi-r.1
for
100832685
ath-u.5
for
AT1G13030
gma-u.5
for
100806980
gma-u.5
for
100776892
sly-u.5
for
101246716
sly-u.5
for
101246016
bra-r.6
for
103871964
bra-r.6
for
103843087
vvi-u.5
for
100256103
ppo-u.5
for
18102411
ppo-u.5
for
7469039
mtr-u.5
for
11427783
ghi-r.1
for
107917465
ghi-r.1
for
107922034
bna-r.1
for
106412543
bna-r.1
for
106401970
bna-r.1
for
106401180
sot-r.1
for
102603469
sot-r.1
for
102604548
cit-r.1
for
102620183
nta-r.1
for
107820583
nta-r.1
for
107800776
nta-r.1
for
107793536
cre-r.1
for
CHLRE_13g592400v5


Ortholog ID: 6399
Species zma zma sbi osa tae tae tae hvu bdi ath gma gma sly sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot sot cit nta nta nta cre
Symbol LOC100280055 LOC100384247 LOC8070853 LOC4352003 LOC123139527 LOC123062297 LOC123182581 LOC123447518 LOC100832685 AT1G13030 LOC100806980 LOC100776892 LOC101246716 LOC101246016 LOC103871964 LOC103843087 LOC100256103 LOC18102411 LOC7469039 LOC11427783 LOC107917465 LOC107922034 LOC106401970 LOC106401180 LOC106346451 LOC102603469 LOC102604548 LOC102620183 LOC107820583 LOC107793536 LOC107809868 CHLRE_13g592400v5
Function* uncharacterized LOC100280055 uncharacterized LOC100384247 coilin coilin coilin coilin coilin coilin coilin sphere organelles protein-like protein coilin coilin coilin coilin-like coilin coilin coilin coilin coilin coilin coilin coilin coilin-like coilin coilin coilin-like coilin coilin coilin uncharacterized LOC107793536 uncharacterized LOC107809868 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma03018 RNA degradation 3
zma03015 mRNA surveillance pathway 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae03013 Nucleocytoplasmic transport 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi03060 Protein export 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot03018 RNA degradation 2
sot03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100280055 100384247 8070853 4352003 123139527 123062297 123182581 123447518 100832685 837860 100806980 100776892 101246716 101246016 103871964 103843087 100256103 18102411 7469039 11427783 107917465 107922034 106401970 106401180 106346451 102603469 102604548 102620183 107820583 107793536 107809868 5718665
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