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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106412543   coilin 
 bna-r.1   106401970   coilin-like 
 bna-r.1   106401180   coilin 
 bna-r.1   106346451   coilin 
 bra-r.6   103871964   coilin 
 bra-r.6   103843087   coilin 
 ath-u.5   AT1G13030   sphere organelles protein-like protein 
 ghi-r.1   107917465   coilin 
 ghi-r.1   107922034   coilin 
 cit-r.1   102620183   coilin 
 gma-u.5   100806980   coilin 
 gma-u.5   100776892   coilin 
 vvi-u.5   100256103   coilin 
 ppo-u.5   18102411   coilin 
 ppo-u.5   7469039   coilin 
 mtr-u.5   11427783   coilin 
 sly-u.5   101246716   coilin 
 sly-u.5   101246016   coilin-like 
 sot-r.1   102603469   coilin-like 
 sot-r.1   102604548   coilin 
 nta-r.1   107820583   coilin 
 nta-r.1   107800776   coilin-like 
 nta-r.1   107793536   uncharacterized LOC107793536 
 osa-u.5   4352003   coilin 
 zma-u.5   100384247   uncharacterized LOC100384247 
 zma-u.5   100280055   uncharacterized LOC100280055 
 tae-r.2   123139527   coilin 
 tae-r.2   123062297   coilin 
 tae-r.2   123182581   coilin 
 hvu-r.1   123447518   coilin 
 sbi-r.1   8070853   coilin 
 bdi-r.1   100832685   coilin 
 cre-r.1   CHLRE_13g592400v5   uncharacterized protein 

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Top 50 coexpressed genes to 106412543 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106412543 (bna-r.1 coexpression data)

CoexMap"106412543"


bnaLOC106412543 | Entrez gene ID : 106412543    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 1 2 1 2 1 2 2 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000387 [list] [network] spliceosomal snRNP assembly  (90 genes)  IEA  
GO CC
GO:0015030 [list] [network] Cajal body  (4 genes)  IEA  
GO MF
GO:0030620 [list] [network] U2 snRNA binding  (25 genes)  IEA  
GO:0030619 [list] [network] U1 snRNA binding  (47 genes)  IEA  
Protein XP_013708905.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013708905.2)
Subcellular
localization
TargetP
other 5,  mito 5  (predict for XP_013708905.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106412543
bna-r.1
for
106401970
bna-r.1
for
106401180
bna-r.1
for
106346451
bra-r.6
for
103871964
bra-r.6
for
103843087
ath-u.5
for
AT1G13030
ghi-r.1
for
107917465
ghi-r.1
for
107922034
cit-r.1
for
102620183
gma-u.5
for
100806980
gma-u.5
for
100776892
vvi-u.5
for
100256103
ppo-u.5
for
18102411
ppo-u.5
for
7469039
mtr-u.5
for
11427783
sly-u.5
for
101246716
sly-u.5
for
101246016
sot-r.1
for
102603469
sot-r.1
for
102604548
nta-r.1
for
107820583
nta-r.1
for
107800776
nta-r.1
for
107793536
osa-u.5
for
4352003
zma-u.5
for
100384247
zma-u.5
for
100280055
tae-r.2
for
123139527
tae-r.2
for
123062297
tae-r.2
for
123182581
hvu-r.1
for
123447518
sbi-r.1
for
8070853
bdi-r.1
for
100832685
cre-r.1
for
CHLRE_13g592400v5


Ortholog ID: 6399
Species bna bna bna bra bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106401970 LOC106401180 LOC106346451 LOC103871964 LOC103843087 AT1G13030 LOC107917465 LOC107922034 LOC102620183 LOC100806980 LOC100776892 LOC100256103 LOC18102411 LOC7469039 LOC11427783 LOC101246716 LOC101246016 LOC102603469 LOC102604548 LOC107820583 LOC107793536 LOC107809868 LOC4352003 LOC100384247 LOC100280055 LOC123139527 LOC123062297 LOC123182581 LOC123447518 LOC8070853 LOC100832685 CHLRE_13g592400v5
Function* coilin-like coilin coilin coilin coilin sphere organelles protein-like protein coilin coilin coilin coilin coilin coilin coilin coilin coilin coilin coilin-like coilin-like coilin coilin uncharacterized LOC107793536 uncharacterized LOC107809868 coilin uncharacterized LOC100384247 uncharacterized LOC100280055 coilin coilin coilin coilin coilin coilin uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi03060 Protein export 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot03018 RNA degradation 2
sot03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma03018 RNA degradation 3
zma03015 mRNA surveillance pathway 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae03013 Nucleocytoplasmic transport 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106401970 106401180 106346451 103871964 103843087 837860 107917465 107922034 102620183 100806980 100776892 100256103 18102411 7469039 11427783 101246716 101246016 102603469 102604548 107820583 107793536 107809868 4352003 100384247 100280055 123139527 123062297 123182581 123447518 8070853 100832685 5718665
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