ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101246716	coilin
sly-r.6	101246716	coilin
sly-u.5	101246016	coilin-like
sot-r.1	102603469	coilin-like
sot-r.1	102604548	coilin
nta-r.1	107820583	coilin
nta-r.1	107800776	coilin-like
nta-r.1	107793536	uncharacterized LOC107793536
ath-u.5	AT1G13030	sphere organelles protein-like protein
gma-u.5	100806980	coilin
gma-u.5	100776892	coilin
bra-r.6	103871964	coilin
bra-r.6	103843087	coilin
vvi-u.5	100256103	coilin
ppo-u.5	18102411	coilin
ppo-u.5	7469039	coilin
mtr-u.5	11427783	coilin
ghi-r.1	107917465	coilin
ghi-r.1	107922034	coilin
bna-r.1	106412543	coilin
bna-r.1	106401970	coilin-like
bna-r.1	106401180	coilin
cit-r.1	102620183	coilin
osa-u.5	4352003	coilin
zma-u.5	100384247	uncharacterized LOC100384247
zma-u.5	100280055	uncharacterized LOC100280055
tae-r.2	123139527	coilin
tae-r.2	123062297	coilin
tae-r.2	123182581	coilin
hvu-r.1	123447518	coilin
sbi-r.1	8070853	coilin
bdi-r.1	100832685	coilin
cre-r.1	CHLRE_13g592400v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0000387 [list] [network] spliceosomal snRNP assembly

(24 genes)

IEA

GO CC

GO:0015030 [list] [network] Cajal body

(2 genes)

IEA

GO MF

GO:0030620 [list] [network] U2 snRNA binding	(5 genes)	IEA
GO:0030619 [list] [network] U1 snRNA binding	(6 genes)	IEA

Protein

XP_004239144.2 [sequence] [blastp]
XP_010320943.2 [sequence] [blastp]
XP_010320944.2 [sequence] [blastp]
XP_010320945.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_004239144.2)
nucl 10	(predict for XP_010320943.2)
nucl 10	(predict for XP_010320944.2)
nucl 10	(predict for XP_010320945.2)

Subcellular
localization
TargetP

other 7	(predict for XP_004239144.2)
other 7	(predict for XP_010320943.2)
other 7	(predict for XP_010320944.2)
other 7	(predict for XP_010320945.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101246716	sly-r.6 for 101246716	sly-u.5 for 101246016	sot-r.1 for 102603469	sot-r.1 for 102604548	nta-r.1 for 107820583	nta-r.1 for 107800776	nta-r.1 for 107793536	ath-u.5 for AT1G13030	gma-u.5 for 100806980	gma-u.5 for 100776892	bra-r.6 for 103871964	bra-r.6 for 103843087	vvi-u.5 for 100256103	ppo-u.5 for 18102411	ppo-u.5 for 7469039	mtr-u.5 for 11427783	ghi-r.1 for 107917465	ghi-r.1 for 107922034	bna-r.1 for 106412543	bna-r.1 for 106401970	bna-r.1 for 106401180	cit-r.1 for 102620183	osa-u.5 for 4352003	zma-u.5 for 100384247	zma-u.5 for 100280055	tae-r.2 for 123139527	tae-r.2 for 123062297	tae-r.2 for 123182581	hvu-r.1 for 123447518	sbi-r.1 for 8070853	bdi-r.1 for 100832685	cre-r.1 for CHLRE_13g592400v5

Ortholog

Ortholog ID: 6399

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

coilin

coilin-like

coilin

uncharacterized LOC107793536

uncharacterized LOC107809868

sphere organelles protein-like protein

coilin

coilin-like

coilin

uncharacterized LOC100384247

uncharacterized LOC100280055

coilin

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	3
sly03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	3
sot03018	RNA degradation	2
sot03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3
ath03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	2
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	4
ghi03060	Protein export	2
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	4
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03440	Homologous recombination	2
osa03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	5
zma03018	RNA degradation	3
zma03015	mRNA surveillance pathway	2
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	3
tae03013	Nucleocytoplasmic transport	2
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3
sbi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

101246716

101246016

102603469

102604548

107820583

107793536

107809868

837860

100806980

100776892

103871964

103843087

100256103

18102411

7469039

11427783

107917465

107922034

106401970

106401180

106346451

102620183

4352003

100384247

100280055

123139527

123062297

123182581

123447518

8070853

100832685

5718665

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101246716 (sly-u.5 coexpression data)

Top 50 enrichment test to 101246716 (sly-u.5 coexpression data)


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	3	1	2	2	1	2	1	2	3	1	1	2	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101246716 (sly-u.5 coexpression data)

Top 50 enrichment test to 101246716 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**