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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100798230   60S ribosomal protein L35 
 gma-r.7   100798230   60S ribosomal protein L35 
 gma-m.5   100798230   60S ribosomal protein L35 
 gma-u.5   100305671   uncharacterized LOC100305671 
 gma-u.5   100801539   60S ribosomal protein L35 
 gma-u.5   100789845   60S ribosomal protein L35 
 mtr-u.5   11412433   60S ribosomal protein L35 
 mtr-u.5   11408161   60S ribosomal protein L35 
 mtr-u.5   11446573   60S ribosomal protein L35 
 ppo-u.5   7491950   60S ribosomal protein L35 
 ppo-u.5   7469794   60S ribosomal protein L35 
 ppo-u.5   7458614   60S ribosomal protein L35 
 ath-u.5   AT2G39390   Ribosomal L29 family protein 
 ath-u.5   AT3G09500   Ribosomal L29 family protein 
 ath-u.5   AT3G55170   Ribosomal L29 family protein 
 vvi-u.5   100265729   large ribosomal subunit protein uL29 
 vvi-u.5   100246718   large ribosomal subunit protein uL29 
 sly-u.5   101256286   large ribosomal subunit protein uL29 
 sly-u.5   101267698   large ribosomal subunit protein uL29-like 
 sly-u.5   778319   60S ribosomal protein L35-like 
 osa-u.5   4329423   large ribosomal subunit protein uL29 
 osa-u.5   4335607   large ribosomal subunit protein uL29 
 zma-u.5   100282133   60S ribosomal protein L35 
 zma-u.5   100282013   60S ribosomal protein L35 
 zma-u.5   100281802   60S ribosomal protein L35 

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Top 50 coexpressed genes to 100798230 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100798230 (gma-u.5 coexpression data)

CoexMap"100798230"


gmaLOC100798230 | Entrez gene ID : 100798230      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 6 3 3 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (36 genes)  IEA  
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (230 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
Protein XP_003547464.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_003547464.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003547464.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100798230

.
gma-r.7
for
100798230

.
gma-m.5
for
100798230

.
gma-u.5
for
100305671

.
gma-u.5
for
100801539

.
gma-u.5
for
100789845

.
mtr-u.5
for
11412433

.
mtr-u.5
for
11408161

.
mtr-u.5
for
11446573

.
ppo-u.5
for
7491950

.
ppo-u.5
for
7469794

.
ppo-u.5
for
7458614

.
ath-u.5
for
AT2G39390

.
ath-u.5
for
AT3G09500

.
ath-u.5
for
AT3G55170

.
vvi-u.5
for
100265729

.
vvi-u.5
for
100246718

.
sly-u.5
for
101256286

.
sly-u.5
for
101267698

.
sly-u.5
for
778319

.
osa-u.5
for
4329423

.
osa-u.5
for
4335607

.
zma-u.5
for
100282133

.
zma-u.5
for
100282013

.
zma-u.5
for
100281802

.


Ortholog ID: 1340
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT2G39390 AT3G55170 LOC100801539 LOC100305671 LOC778319 LOC101256286 LOC4329423 LOC4335607 LOC100282133 LOC100282013 LOC103847436 LOC103870540 LOC100265729 LOC100246718 LOC7458614 LOC7491950 LOC11408161 LOC11446573 LOC123189008 LOC123053102 LOC123426489 LOC107932419 LOC107918620 LOC106452747 LOC106439191 CHLRE_14g617900v5 LOC8056070 LOC8059570 LOC102577759 LOC102586719 LOC102618448 LOC102618082 LOC100824864 LOC100820930 LOC107822355 LOC142166078
Function* Ribosomal L29 family protein Ribosomal L29 family protein 60S ribosomal protein L35 uncharacterized LOC100305671 60S ribosomal protein L35-like large ribosomal subunit protein uL29 large ribosomal subunit protein uL29 large ribosomal subunit protein uL29 60S ribosomal protein L35 60S ribosomal protein L35 60S ribosomal protein L35-4 60S ribosomal protein L35-1 large ribosomal subunit protein uL29 large ribosomal subunit protein uL29 60S ribosomal protein L35 60S ribosomal protein L35 60S ribosomal protein L35 60S ribosomal protein L35 60S ribosomal protein L35-2 60S ribosomal protein L35-2 60S ribosomal protein L35-4 60S ribosomal protein L35 60S ribosomal protein L35 60S ribosomal protein L35-1 60S ribosomal protein L35-1 ribosomal protein L35 60S ribosomal protein L35-4 60S ribosomal protein L35-4 uncharacterized LOC102577759 60S ribosomal protein L35 60S ribosomal protein L35 60S ribosomal protein L35-like 60S ribosomal protein L35-4 60S ribosomal protein L35-2 large ribosomal subunit protein uL29 large ribosomal subunit protein uL29
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
sot00220 Arginine biosynthesis 2
sot00240 Pyrimidine metabolism 2
sot00250 Alanine, aspartate and glutamate metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta04120 Ubiquitin mediated proteolysis 4
nta03018 RNA degradation 3
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818524 824683 100801539 100305671 778319 101256286 4329423 4335607 100282133 100282013 103847436 103870540 100265729 100246718 7458614 7491950 11408161 11446573 123189008 123053102 123426489 107932419 107918620 106452747 106439191 5715848 8056070 8059570 102577759 102586719 102618448 102618082 100824864 100820930 107822355 142166078
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