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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101249237   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 sly-r.6   101249237   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ath-u.5   OTP84   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   102670454   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 vvi-u.5   100259539   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ppo-u.5   7477787   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 mtr-u.5   11439625   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 osa-u.5   4334962   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 zma-u.5   103629856   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 

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Top 50 coexpressed genes to 101249237 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101249237 (sly-u.5 coexpression data)

CoexMap"101249237"


slyLOC101249237 | Entrez gene ID : 101249237    
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004233766.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_004233766.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004233766.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101249237

.
sly-r.6
for
101249237

.
ath-u.5
for
OTP84

.
gma-u.5
for
102670454

.
vvi-u.5
for
100259539

.
ppo-u.5
for
7477787

.
mtr-u.5
for
11439625

.
osa-u.5
for
4334962

.
zma-u.5
for
103629856

.


Ortholog ID: 11697
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol OTP84 LOC102670454 LOC101249237 LOC4334962 LOC103629856 LOC103841648 LOC100259539 LOC7477787 LOC11439625 LOC123050968 LOC123186937 LOC123431390 LOC107927561 LOC107945281 LOC106451570 LOC106415730 LOC8058856 LOC102578389 LOC102609813 LOC100821270 LOC107764096 LOC107814339
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824910 102670454 101249237 4334962 103629856 103841648 100259539 7477787 11439625 123050968 123186937 123431390 107927561 107945281 106451570 106415730 8058856 102578389 102609813 100821270 107764096 107814339
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