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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102609813   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ath-u.5   OTP84   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103841648   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ghi-r.1   107927561   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ghi-r.1   107945281   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 bna-r.1   106415730   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 bna-r.1   106451570   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 gma-u.5   102670454   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 vvi-u.5   100259539   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ppo-u.5   7477787   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 mtr-u.5   11439625   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 sly-u.5   101249237   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 sot-r.1   102578389   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 nta-r.1   107764096   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 nta-r.1   107814339   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 osa-u.5   4334962   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 zma-u.5   103629856   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 tae-r.2   123186937   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 tae-r.2   123050968   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 hvu-r.1   123431390   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 sbi-r.1   8058856   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 bdi-r.1   100821270   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 

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Top 50 coexpressed genes to 102609813 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102609813 (cit-r.1 coexpression data)

CoexMap"102609813"


citLOC102609813 | Entrez gene ID : 102609813    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 1 1 1 1 1 1 2 1 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006468579.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_006468579.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006468579.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102609813
ath-u.5
for
OTP84
bra-r.6
for
103841648
ghi-r.1
for
107927561
ghi-r.1
for
107945281
bna-r.1
for
106415730
bna-r.1
for
106451570
gma-u.5
for
102670454
vvi-u.5
for
100259539
ppo-u.5
for
7477787
mtr-u.5
for
11439625
sly-u.5
for
101249237
sot-r.1
for
102578389
nta-r.1
for
107764096
nta-r.1
for
107814339
osa-u.5
for
4334962
zma-u.5
for
103629856
tae-r.2
for
123186937
tae-r.2
for
123050968
hvu-r.1
for
123431390
sbi-r.1
for
8058856
bdi-r.1
for
100821270


Ortholog ID: 11697
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC102609813 OTP84 LOC103841648 LOC107927561 LOC107945281 LOC106415730 LOC106451570 LOC102670454 LOC100259539 LOC7477787 LOC11439625 LOC101249237 LOC102578389 LOC107764096 LOC107814339 LOC4334962 LOC103629856 LOC123186937 LOC123050968 LOC123431390 LOC8058856 LOC100821270
Function* pentatricopeptide repeat-containing protein At3g57430, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102609813 824910 103841648 107927561 107945281 106415730 106451570 102670454 100259539 7477787 11439625 101249237 102578389 107764096 107814339 4334962 103629856 123186937 123050968 123431390 8058856 100821270
The preparation time of this page was 2.1 [sec].