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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123186937   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 tae-r.2   123050968   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 hvu-r.1   123431390   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 bdi-r.1   100821270   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 osa-u.5   4334962   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 zma-u.5   103629856   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 sbi-r.1   8058856   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ath-u.5   OTP84   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   102670454   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 sly-u.5   101249237   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 bra-r.6   103841648   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 vvi-u.5   100259539   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ppo-u.5   7477787   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 mtr-u.5   11439625   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ghi-r.1   107945281   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ghi-r.1   107927561   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 bna-r.1   106451570   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 bna-r.1   106415730   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 sot-r.1   102578389   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 cit-r.1   102609813   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 nta-r.1   107764096   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 nta-r.1   107814339   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 

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Top 50 coexpressed genes to 123186937 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123186937 (tae-r.2 coexpression data)

CoexMap"123186937"


taeLOC123186937 | Entrez gene ID : 123186937    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044454602.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_044454602.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044454602.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123186937
tae-r.2
for
123050968
hvu-r.1
for
123431390
bdi-r.1
for
100821270
osa-u.5
for
4334962
zma-u.5
for
103629856
sbi-r.1
for
8058856
ath-u.5
for
OTP84
gma-u.5
for
102670454
sly-u.5
for
101249237
bra-r.6
for
103841648
vvi-u.5
for
100259539
ppo-u.5
for
7477787
mtr-u.5
for
11439625
ghi-r.1
for
107945281
ghi-r.1
for
107927561
bna-r.1
for
106451570
bna-r.1
for
106415730
sot-r.1
for
102578389
cit-r.1
for
102609813
nta-r.1
for
107764096
nta-r.1
for
107814339


Ortholog ID: 11697
Species tae tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123186937 LOC123050968 LOC123431390 LOC100821270 LOC4334962 LOC103629856 LOC8058856 OTP84 LOC102670454 LOC101249237 LOC103841648 LOC100259539 LOC7477787 LOC11439625 LOC107945281 LOC107927561 LOC106451570 LOC106415730 LOC102578389 LOC102609813 LOC107764096 LOC107814339
Function* pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123186937 123050968 123431390 100821270 4334962 103629856 8058856 824910 102670454 101249237 103841648 100259539 7477787 11439625 107945281 107927561 106451570 106415730 102578389 102609813 107764096 107814339
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