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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4334962   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 osa-r.6   4334962   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 osa-e.1   4334962   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 zma-u.5   103629856   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ath-u.5   OTP84   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   102670454   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 sly-u.5   101249237   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 vvi-u.5   100259539   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ppo-u.5   7477787   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 mtr-u.5   11439625   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 

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Top 50 coexpressed genes to 4334962 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4334962 (osa-u.5 coexpression data)

CoexMap"4334962"


osaLOC4334962 | Entrez gene ID : 4334962      
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (840 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015634033.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_015634033.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_015634033.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4334962
osa-r.6
for
4334962
osa-e.1
for
4334962
zma-u.5
for
103629856
ath-u.5
for
OTP84
gma-u.5
for
102670454
sly-u.5
for
101249237
vvi-u.5
for
100259539
ppo-u.5
for
7477787
mtr-u.5
for
11439625


Ortholog ID: 11697
Species osa tae tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC4334962 LOC123050968 LOC123186937 LOC123431390 LOC100821270 LOC103629856 LOC8058856 OTP84 LOC102670454 LOC101249237 LOC103841648 LOC100259539 LOC7477787 LOC11439625 LOC107927561 LOC107945281 LOC106451570 LOC106415730 LOC102578389 LOC102609813 LOC107764096 LOC107814339
Function* pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4334962 123050968 123186937 123431390 100821270 103629856 8058856 824910 102670454 101249237 103841648 100259539 7477787 11439625 107927561 107945281 106451570 106415730 102578389 102609813 107764096 107814339
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